Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
LINC00474Q9P2X8 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00474Q9P2X8 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00474Q9P2X8 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00474Q9P2X8 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00474Q9P2X8 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC13.13□□□□□ -0.31
LINC00474Q9P2X8 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC13.13□□□□□ -0.31
LINC00474Q9P2X8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00474Q9P2X8 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC13.13□□□□□ -0.31
LINC00474Q9P2X8 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00474Q9P2X8 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
LINC00474Q9P2X8 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00474Q9P2X8 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00474Q9P2X8 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00474Q9P2X8 DLX3-202ENST00000512495 834 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00474Q9P2X8 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC13.13□□□□□ -0.31
LINC00474Q9P2X8 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00474Q9P2X8 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00474Q9P2X8 AC005181.1-201ENST00000604782 1256 ntBASIC13.13□□□□□ -0.31
LINC00474Q9P2X8 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00474Q9P2X8 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00474Q9P2X8 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00474Q9P2X8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00474Q9P2X8 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00474Q9P2X8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00474Q9P2X8 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00474Q9P2X8 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC13.13□□□□□ -0.31
LINC00474Q9P2X8 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC13.13□□□□□ -0.31
LINC00474Q9P2X8 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
LINC00474Q9P2X8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
LINC00474Q9P2X8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00474Q9P2X8 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00474Q9P2X8 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00474Q9P2X8 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00474Q9P2X8 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00474Q9P2X8 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC00474Q9P2X8 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00474Q9P2X8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC00474Q9P2X8 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00474Q9P2X8 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00474Q9P2X8 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00474Q9P2X8 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
LINC00474Q9P2X8 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00474Q9P2X8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC13.12□□□□□ -0.31
LINC00474Q9P2X8 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC13.12□□□□□ -0.31
LINC00474Q9P2X8 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00474Q9P2X8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC00474Q9P2X8 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00474Q9P2X8 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00474Q9P2X8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00474Q9P2X8 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00474Q9P2X8 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00474Q9P2X8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
LINC00474Q9P2X8 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00474Q9P2X8 ERF-202ENST00000440177 2032 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC00474Q9P2X8 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00474Q9P2X8 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00474Q9P2X8 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC00474Q9P2X8 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
LINC00474Q9P2X8 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00474Q9P2X8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
LINC00474Q9P2X8 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00474Q9P2X8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00474Q9P2X8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00474Q9P2X8 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00474Q9P2X8 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
LINC00474Q9P2X8 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC00474Q9P2X8 AL512625.2-201ENST00000417533 625 ntBASIC13.11□□□□□ -0.31
LINC00474Q9P2X8 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC00474Q9P2X8 AC006970.2-201ENST00000450065 779 ntBASIC13.11□□□□□ -0.31
LINC00474Q9P2X8 RARRES2P4-201ENST00000514074 484 ntBASIC13.11□□□□□ -0.31
LINC00474Q9P2X8 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC00474Q9P2X8 AC073111.5-205ENST00000641717 521 ntBASIC13.11□□□□□ -0.31
LINC00474Q9P2X8 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00474Q9P2X8 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00474Q9P2X8 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC13.11□□□□□ -0.31
LINC00474Q9P2X8 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00474Q9P2X8 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00474Q9P2X8 AC006128.1-201ENST00000624704 1661 ntBASIC13.11□□□□□ -0.31
LINC00474Q9P2X8 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
LINC00474Q9P2X8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00474Q9P2X8 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00474Q9P2X8 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00474Q9P2X8 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
LINC00474Q9P2X8 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00474Q9P2X8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00474Q9P2X8 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00474Q9P2X8 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00474Q9P2X8 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
LINC00474Q9P2X8 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00474Q9P2X8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00474Q9P2X8 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC00474Q9P2X8 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00474Q9P2X8 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00474Q9P2X8 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00474Q9P2X8 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC13.1□□□□□ -0.31
LINC00474Q9P2X8 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC00474Q9P2X8 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00474Q9P2X8 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00474Q9P2X8 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms