Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HCFC1R1Q9NWW0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HCFC1R1Q9NWW0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HCFC1R1Q9NWW0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
HCFC1R1Q9NWW0 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HCFC1R1Q9NWW0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HCFC1R1Q9NWW0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
HCFC1R1Q9NWW0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
HCFC1R1Q9NWW0 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HCFC1R1Q9NWW0 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.11■□□□□ 0.97
HCFC1R1Q9NWW0 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.11■□□□□ 0.97
HCFC1R1Q9NWW0 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.11■□□□□ 0.97
HCFC1R1Q9NWW0 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.11■□□□□ 0.97
HCFC1R1Q9NWW0 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.11■□□□□ 0.97
HCFC1R1Q9NWW0 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HCFC1R1Q9NWW0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
HCFC1R1Q9NWW0 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.11■□□□□ 0.97
HCFC1R1Q9NWW0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HCFC1R1Q9NWW0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.1■□□□□ 0.97
HCFC1R1Q9NWW0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
HCFC1R1Q9NWW0 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HCFC1R1Q9NWW0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HCFC1R1Q9NWW0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HCFC1R1Q9NWW0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HCFC1R1Q9NWW0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HCFC1R1Q9NWW0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
HCFC1R1Q9NWW0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HCFC1R1Q9NWW0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HCFC1R1Q9NWW0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HCFC1R1Q9NWW0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HCFC1R1Q9NWW0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.1■□□□□ 0.97
HCFC1R1Q9NWW0 MIR1224-201ENST00000408193 85 ntBASIC21.1■□□□□ 0.97
HCFC1R1Q9NWW0 AC087499.1-201ENST00000418141 1075 ntBASIC21.1■□□□□ 0.97
HCFC1R1Q9NWW0 AC023632.3-201ENST00000521633 145 ntBASIC21.1■□□□□ 0.97
HCFC1R1Q9NWW0 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HCFC1R1Q9NWW0 AL121829.2-201ENST00000620908 328 ntBASIC21.1■□□□□ 0.97
HCFC1R1Q9NWW0 AC133561.5-201ENST00000635547 218 ntBASIC21.1■□□□□ 0.97
HCFC1R1Q9NWW0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
HCFC1R1Q9NWW0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HCFC1R1Q9NWW0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.1■□□□□ 0.97
HCFC1R1Q9NWW0 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HCFC1R1Q9NWW0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.1■□□□□ 0.97
HCFC1R1Q9NWW0 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HCFC1R1Q9NWW0 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.09■□□□□ 0.97
HCFC1R1Q9NWW0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HCFC1R1Q9NWW0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HCFC1R1Q9NWW0 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HCFC1R1Q9NWW0 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.09■□□□□ 0.97
HCFC1R1Q9NWW0 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.09■□□□□ 0.97
HCFC1R1Q9NWW0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HCFC1R1Q9NWW0 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.09■□□□□ 0.97
HCFC1R1Q9NWW0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
HCFC1R1Q9NWW0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HCFC1R1Q9NWW0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.09■□□□□ 0.97
HCFC1R1Q9NWW0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HCFC1R1Q9NWW0 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HCFC1R1Q9NWW0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HCFC1R1Q9NWW0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
HCFC1R1Q9NWW0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HCFC1R1Q9NWW0 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
HCFC1R1Q9NWW0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.08■□□□□ 0.97
HCFC1R1Q9NWW0 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.08■□□□□ 0.97
HCFC1R1Q9NWW0 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HCFC1R1Q9NWW0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HCFC1R1Q9NWW0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HCFC1R1Q9NWW0 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HCFC1R1Q9NWW0 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.08■□□□□ 0.97
HCFC1R1Q9NWW0 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.08■□□□□ 0.97
HCFC1R1Q9NWW0 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HCFC1R1Q9NWW0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.08■□□□□ 0.97
HCFC1R1Q9NWW0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HCFC1R1Q9NWW0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.08■□□□□ 0.97
HCFC1R1Q9NWW0 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HCFC1R1Q9NWW0 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.08■□□□□ 0.97
HCFC1R1Q9NWW0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.08■□□□□ 0.97
HCFC1R1Q9NWW0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HCFC1R1Q9NWW0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.08■□□□□ 0.97
HCFC1R1Q9NWW0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.08■□□□□ 0.97
HCFC1R1Q9NWW0 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.08■□□□□ 0.97
HCFC1R1Q9NWW0 AC133561.1-201ENST00000568600 2415 ntBASIC21.08■□□□□ 0.96
HCFC1R1Q9NWW0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HCFC1R1Q9NWW0 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HCFC1R1Q9NWW0 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HCFC1R1Q9NWW0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.08■□□□□ 0.96
HCFC1R1Q9NWW0 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
HCFC1R1Q9NWW0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
HCFC1R1Q9NWW0 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HCFC1R1Q9NWW0 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.07■□□□□ 0.96
HCFC1R1Q9NWW0 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HCFC1R1Q9NWW0 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.07■□□□□ 0.96
HCFC1R1Q9NWW0 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.07■□□□□ 0.96
HCFC1R1Q9NWW0 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HCFC1R1Q9NWW0 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.07■□□□□ 0.96
HCFC1R1Q9NWW0 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.07■□□□□ 0.96
HCFC1R1Q9NWW0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
HCFC1R1Q9NWW0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.07■□□□□ 0.96
HCFC1R1Q9NWW0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HCFC1R1Q9NWW0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.07■□□□□ 0.96
HCFC1R1Q9NWW0 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.07■□□□□ 0.96
HCFC1R1Q9NWW0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms