Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC29.19■■■□□ 2.26
SLC52A1Q9NWF4 AC116562.2-201ENST00000507042 360 ntBASIC29.19■■■□□ 2.26
SLC52A1Q9NWF4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC29.19■■■□□ 2.26
SLC52A1Q9NWF4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC29.19■■■□□ 2.26
SLC52A1Q9NWF4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC29.19■■■□□ 2.26
SLC52A1Q9NWF4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
SLC52A1Q9NWF4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
SLC52A1Q9NWF4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC29.19■■■□□ 2.26
SLC52A1Q9NWF4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
SLC52A1Q9NWF4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
SLC52A1Q9NWF4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC29.18■■■□□ 2.26
SLC52A1Q9NWF4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC29.18■■■□□ 2.26
SLC52A1Q9NWF4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC29.18■■■□□ 2.26
SLC52A1Q9NWF4 AP002982.1-201ENST00000492365 877 ntBASIC29.18■■■□□ 2.26
SLC52A1Q9NWF4 AL049597.2-201ENST00000565575 961 ntBASIC29.18■■■□□ 2.26
SLC52A1Q9NWF4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC29.18■■■□□ 2.26
SLC52A1Q9NWF4 AL031963.3-201ENST00000606441 850 ntBASIC29.18■■■□□ 2.26
SLC52A1Q9NWF4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC29.18■■■□□ 2.26
SLC52A1Q9NWF4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC29.18■■■□□ 2.26
SLC52A1Q9NWF4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC29.18■■■□□ 2.26
SLC52A1Q9NWF4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC29.18■■■□□ 2.26
SLC52A1Q9NWF4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
SLC52A1Q9NWF4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
SLC52A1Q9NWF4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
SLC52A1Q9NWF4 AC005521.1-201ENST00000393351 872 ntBASIC29.17■■■□□ 2.26
SLC52A1Q9NWF4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC29.17■■■□□ 2.26
SLC52A1Q9NWF4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
SLC52A1Q9NWF4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
SLC52A1Q9NWF4 GUSBP5-202ENST00000510805 1989 ntBASIC29.17■■■□□ 2.26
SLC52A1Q9NWF4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
SLC52A1Q9NWF4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC29.16■■■□□ 2.26
SLC52A1Q9NWF4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC29.16■■■□□ 2.26
SLC52A1Q9NWF4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC29.16■■■□□ 2.26
SLC52A1Q9NWF4 ARMC10P1-201ENST00000313754 855 ntBASIC29.16■■■□□ 2.26
SLC52A1Q9NWF4 AC113347.1-201ENST00000413321 391 ntBASIC29.16■■■□□ 2.26
SLC52A1Q9NWF4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
SLC52A1Q9NWF4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC29.16■■■□□ 2.26
SLC52A1Q9NWF4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC29.16■■■□□ 2.26
SLC52A1Q9NWF4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
SLC52A1Q9NWF4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC29.15■■■□□ 2.26
SLC52A1Q9NWF4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
SLC52A1Q9NWF4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC29.15■■■□□ 2.26
SLC52A1Q9NWF4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC29.15■■■□□ 2.26
SLC52A1Q9NWF4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC29.15■■■□□ 2.26
SLC52A1Q9NWF4 FITM1-202ENST00000559294 800 ntBASIC29.15■■■□□ 2.26
SLC52A1Q9NWF4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC29.15■■■□□ 2.26
SLC52A1Q9NWF4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
SLC52A1Q9NWF4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC29.15■■■□□ 2.26
SLC52A1Q9NWF4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC29.15■■■□□ 2.26
SLC52A1Q9NWF4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC29.14■■■□□ 2.26
SLC52A1Q9NWF4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC29.14■■■□□ 2.26
SLC52A1Q9NWF4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC29.14■■■□□ 2.26
SLC52A1Q9NWF4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
SLC52A1Q9NWF4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
SLC52A1Q9NWF4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
SLC52A1Q9NWF4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC29.14■■■□□ 2.26
SLC52A1Q9NWF4 KSR1P1-201ENST00000446298 240 ntBASIC29.14■■■□□ 2.26
SLC52A1Q9NWF4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC29.14■■■□□ 2.26
SLC52A1Q9NWF4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC29.14■■■□□ 2.26
SLC52A1Q9NWF4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC29.13■■■□□ 2.25
SLC52A1Q9NWF4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
SLC52A1Q9NWF4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC29.13■■■□□ 2.25
SLC52A1Q9NWF4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
SLC52A1Q9NWF4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
SLC52A1Q9NWF4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC29.13■■■□□ 2.25
SLC52A1Q9NWF4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC29.13■■■□□ 2.25
SLC52A1Q9NWF4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC29.13■■■□□ 2.25
SLC52A1Q9NWF4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
SLC52A1Q9NWF4 MIR1238-201ENST00000408483 83 ntBASIC29.13■■■□□ 2.25
SLC52A1Q9NWF4 NIFKP9-201ENST00000419265 221 ntBASIC29.13■■■□□ 2.25
SLC52A1Q9NWF4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC29.13■■■□□ 2.25
SLC52A1Q9NWF4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC29.13■■■□□ 2.25
SLC52A1Q9NWF4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC29.13■■■□□ 2.25
SLC52A1Q9NWF4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC29.13■■■□□ 2.25
SLC52A1Q9NWF4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC29.13■■■□□ 2.25
SLC52A1Q9NWF4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC29.13■■■□□ 2.25
SLC52A1Q9NWF4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
SLC52A1Q9NWF4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC29.13■■■□□ 2.25
SLC52A1Q9NWF4 LINC01568-207ENST00000641790 1380 ntBASIC29.13■■■□□ 2.25
SLC52A1Q9NWF4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
SLC52A1Q9NWF4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC29.12■■■□□ 2.25
SLC52A1Q9NWF4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC29.12■■■□□ 2.25
SLC52A1Q9NWF4 AC073508.3-201ENST00000619697 1419 ntBASIC29.12■■■□□ 2.25
SLC52A1Q9NWF4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC29.12■■■□□ 2.25
SLC52A1Q9NWF4 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
SLC52A1Q9NWF4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
SLC52A1Q9NWF4 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
SLC52A1Q9NWF4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
SLC52A1Q9NWF4 DUT-205ENST00000558813 769 ntTSL 2 BASIC29.12■■■□□ 2.25
SLC52A1Q9NWF4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC29.12■■■□□ 2.25
SLC52A1Q9NWF4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
SLC52A1Q9NWF4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
SLC52A1Q9NWF4 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
SLC52A1Q9NWF4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
SLC52A1Q9NWF4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC29.11■■■□□ 2.25
SLC52A1Q9NWF4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
SLC52A1Q9NWF4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC29.11■■■□□ 2.25
SLC52A1Q9NWF4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
SLC52A1Q9NWF4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC29.11■■■□□ 2.25
SLC52A1Q9NWF4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC29.11■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms