Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC24.68■■□□□ 1.54
ECHDC1Q9NTX5 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ECHDC1Q9NTX5 PTBP1P-201ENST00000554374 1601 ntBASIC24.68■■□□□ 1.54
ECHDC1Q9NTX5 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC24.68■■□□□ 1.54
ECHDC1Q9NTX5 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
ECHDC1Q9NTX5 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
ECHDC1Q9NTX5 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
ECHDC1Q9NTX5 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC24.67■■□□□ 1.54
ECHDC1Q9NTX5 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
ECHDC1Q9NTX5 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
ECHDC1Q9NTX5 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
ECHDC1Q9NTX5 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC24.67■■□□□ 1.54
ECHDC1Q9NTX5 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC24.67■■□□□ 1.54
ECHDC1Q9NTX5 RHEB-204ENST00000472642 900 ntTSL 3 BASIC24.67■■□□□ 1.54
ECHDC1Q9NTX5 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC24.67■■□□□ 1.54
ECHDC1Q9NTX5 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
ECHDC1Q9NTX5 AC133041.1-202ENST00000642053 222 ntBASIC24.67■■□□□ 1.54
ECHDC1Q9NTX5 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC24.67■■□□□ 1.54
ECHDC1Q9NTX5 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
ECHDC1Q9NTX5 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC24.67■■□□□ 1.54
ECHDC1Q9NTX5 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
ECHDC1Q9NTX5 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
ECHDC1Q9NTX5 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
ECHDC1Q9NTX5 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ECHDC1Q9NTX5 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC24.66■■□□□ 1.54
ECHDC1Q9NTX5 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC24.66■■□□□ 1.54
ECHDC1Q9NTX5 EMC9-206ENST00000560403 872 ntTSL 2 BASIC24.66■■□□□ 1.54
ECHDC1Q9NTX5 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC24.66■■□□□ 1.54
ECHDC1Q9NTX5 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ECHDC1Q9NTX5 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
ECHDC1Q9NTX5 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
ECHDC1Q9NTX5 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
ECHDC1Q9NTX5 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC24.65■■□□□ 1.54
ECHDC1Q9NTX5 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC24.65■■□□□ 1.54
ECHDC1Q9NTX5 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ECHDC1Q9NTX5 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC24.65■■□□□ 1.54
ECHDC1Q9NTX5 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC24.65■■□□□ 1.54
ECHDC1Q9NTX5 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
ECHDC1Q9NTX5 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
ECHDC1Q9NTX5 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
ECHDC1Q9NTX5 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
ECHDC1Q9NTX5 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC24.64■■□□□ 1.54
ECHDC1Q9NTX5 AC097658.1-201ENST00000475555 843 ntBASIC24.64■■□□□ 1.54
ECHDC1Q9NTX5 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
ECHDC1Q9NTX5 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC24.64■■□□□ 1.54
ECHDC1Q9NTX5 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
ECHDC1Q9NTX5 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC24.64■■□□□ 1.53
ECHDC1Q9NTX5 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
ECHDC1Q9NTX5 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
ECHDC1Q9NTX5 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC24.63■■□□□ 1.53
ECHDC1Q9NTX5 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
ECHDC1Q9NTX5 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC24.63■■□□□ 1.53
ECHDC1Q9NTX5 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC24.63■■□□□ 1.53
ECHDC1Q9NTX5 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ECHDC1Q9NTX5 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ECHDC1Q9NTX5 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
ECHDC1Q9NTX5 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ECHDC1Q9NTX5 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ECHDC1Q9NTX5 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ECHDC1Q9NTX5 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ECHDC1Q9NTX5 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
ECHDC1Q9NTX5 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC24.63■■□□□ 1.53
ECHDC1Q9NTX5 AC083880.1-201ENST00000608266 535 ntBASIC24.63■■□□□ 1.53
ECHDC1Q9NTX5 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC24.63■■□□□ 1.53
ECHDC1Q9NTX5 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
ECHDC1Q9NTX5 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC24.63■■□□□ 1.53
ECHDC1Q9NTX5 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
ECHDC1Q9NTX5 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ECHDC1Q9NTX5 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ECHDC1Q9NTX5 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ECHDC1Q9NTX5 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC24.62■■□□□ 1.53
ECHDC1Q9NTX5 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ECHDC1Q9NTX5 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC24.62■■□□□ 1.53
ECHDC1Q9NTX5 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
ECHDC1Q9NTX5 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ECHDC1Q9NTX5 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
ECHDC1Q9NTX5 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC24.62■■□□□ 1.53
ECHDC1Q9NTX5 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
ECHDC1Q9NTX5 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
ECHDC1Q9NTX5 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC24.62■■□□□ 1.53
ECHDC1Q9NTX5 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
ECHDC1Q9NTX5 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
ECHDC1Q9NTX5 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
ECHDC1Q9NTX5 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
ECHDC1Q9NTX5 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
ECHDC1Q9NTX5 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
ECHDC1Q9NTX5 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC24.61■■□□□ 1.53
ECHDC1Q9NTX5 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
ECHDC1Q9NTX5 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
ECHDC1Q9NTX5 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
ECHDC1Q9NTX5 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
ECHDC1Q9NTX5 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
ECHDC1Q9NTX5 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
ECHDC1Q9NTX5 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
ECHDC1Q9NTX5 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
ECHDC1Q9NTX5 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC24.61■■□□□ 1.53
ECHDC1Q9NTX5 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC24.61■■□□□ 1.53
ECHDC1Q9NTX5 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
ECHDC1Q9NTX5 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC24.61■■□□□ 1.53
ECHDC1Q9NTX5 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms