Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VPS45Q9NRW7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS45Q9NRW7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.84■□□□□ 0.93
VPS45Q9NRW7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
VPS45Q9NRW7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS45Q9NRW7 FAM210CP-201ENST00000445714 574 ntBASIC20.84■□□□□ 0.93
VPS45Q9NRW7 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.84■□□□□ 0.93
VPS45Q9NRW7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.84■□□□□ 0.93
VPS45Q9NRW7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VPS45Q9NRW7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.84■□□□□ 0.93
VPS45Q9NRW7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.84■□□□□ 0.93
VPS45Q9NRW7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
VPS45Q9NRW7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS45Q9NRW7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.84■□□□□ 0.93
VPS45Q9NRW7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.84■□□□□ 0.93
VPS45Q9NRW7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.83■□□□□ 0.93
VPS45Q9NRW7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VPS45Q9NRW7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VPS45Q9NRW7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.83■□□□□ 0.93
VPS45Q9NRW7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
VPS45Q9NRW7 AC027702.1-201ENST00000563810 1770 ntBASIC20.83■□□□□ 0.93
VPS45Q9NRW7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
VPS45Q9NRW7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
VPS45Q9NRW7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.83■□□□□ 0.93
VPS45Q9NRW7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
VPS45Q9NRW7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.83■□□□□ 0.93
VPS45Q9NRW7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.83■□□□□ 0.93
VPS45Q9NRW7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
VPS45Q9NRW7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
VPS45Q9NRW7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
VPS45Q9NRW7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
VPS45Q9NRW7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.83■□□□□ 0.92
VPS45Q9NRW7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
VPS45Q9NRW7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
VPS45Q9NRW7 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.83■□□□□ 0.92
VPS45Q9NRW7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.82■□□□□ 0.92
VPS45Q9NRW7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VPS45Q9NRW7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VPS45Q9NRW7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
VPS45Q9NRW7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
VPS45Q9NRW7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VPS45Q9NRW7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VPS45Q9NRW7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VPS45Q9NRW7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.82■□□□□ 0.92
VPS45Q9NRW7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
VPS45Q9NRW7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
VPS45Q9NRW7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VPS45Q9NRW7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VPS45Q9NRW7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VPS45Q9NRW7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
VPS45Q9NRW7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VPS45Q9NRW7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VPS45Q9NRW7 RPPH1-201ENST00000516869 333 ntBASIC20.82■□□□□ 0.92
VPS45Q9NRW7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.82■□□□□ 0.92
VPS45Q9NRW7 AC060766.5-201ENST00000590539 871 ntBASIC20.82■□□□□ 0.92
VPS45Q9NRW7 AC008403.3-201ENST00000598924 454 ntBASIC20.82■□□□□ 0.92
VPS45Q9NRW7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.82■□□□□ 0.92
VPS45Q9NRW7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VPS45Q9NRW7 AC007225.1-201ENST00000566331 1836 ntBASIC20.82■□□□□ 0.92
VPS45Q9NRW7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VPS45Q9NRW7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.82■□□□□ 0.92
VPS45Q9NRW7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VPS45Q9NRW7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.82■□□□□ 0.92
VPS45Q9NRW7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VPS45Q9NRW7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.81■□□□□ 0.92
VPS45Q9NRW7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VPS45Q9NRW7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.81■□□□□ 0.92
VPS45Q9NRW7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VPS45Q9NRW7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.81■□□□□ 0.92
VPS45Q9NRW7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VPS45Q9NRW7 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.81■□□□□ 0.92
VPS45Q9NRW7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
VPS45Q9NRW7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
VPS45Q9NRW7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
VPS45Q9NRW7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VPS45Q9NRW7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
VPS45Q9NRW7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VPS45Q9NRW7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VPS45Q9NRW7 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VPS45Q9NRW7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
VPS45Q9NRW7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VPS45Q9NRW7 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.8■□□□□ 0.92
VPS45Q9NRW7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
VPS45Q9NRW7 C1QBPP2-201ENST00000528754 825 ntBASIC20.8■□□□□ 0.92
VPS45Q9NRW7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.8■□□□□ 0.92
VPS45Q9NRW7 FAM21FP-204ENST00000608637 956 ntBASIC20.8■□□□□ 0.92
VPS45Q9NRW7 HLA-B-256ENST00000639848 1089 ntBASIC20.8■□□□□ 0.92
VPS45Q9NRW7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
VPS45Q9NRW7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.8■□□□□ 0.92
VPS45Q9NRW7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
VPS45Q9NRW7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
VPS45Q9NRW7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
VPS45Q9NRW7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
VPS45Q9NRW7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.8■□□□□ 0.92
VPS45Q9NRW7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
VPS45Q9NRW7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
VPS45Q9NRW7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.79■□□□□ 0.92
VPS45Q9NRW7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.79■□□□□ 0.92
VPS45Q9NRW7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.79■□□□□ 0.92
VPS45Q9NRW7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms