Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CDC42SE1Q9NRR8 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CDC42SE1Q9NRR8 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
CDC42SE1Q9NRR8 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC10.46□□□□□ -0.74
CDC42SE1Q9NRR8 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.74
CDC42SE1Q9NRR8 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
CDC42SE1Q9NRR8 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC10.46□□□□□ -0.74
CDC42SE1Q9NRR8 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
CDC42SE1Q9NRR8 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CDC42SE1Q9NRR8 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CDC42SE1Q9NRR8 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
CDC42SE1Q9NRR8 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
CDC42SE1Q9NRR8 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.74
CDC42SE1Q9NRR8 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE1Q9NRR8 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
CDC42SE1Q9NRR8 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE1Q9NRR8 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE1Q9NRR8 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE1Q9NRR8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE1Q9NRR8 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC10.45□□□□□ -0.74
CDC42SE1Q9NRR8 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE1Q9NRR8 AC018695.7-201ENST00000624587 2492 ntBASIC10.45□□□□□ -0.74
CDC42SE1Q9NRR8 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE1Q9NRR8 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE1Q9NRR8 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC10.45□□□□□ -0.74
CDC42SE1Q9NRR8 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE1Q9NRR8 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE1Q9NRR8 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
CDC42SE1Q9NRR8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC10.45□□□□□ -0.74
CDC42SE1Q9NRR8 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE1Q9NRR8 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE1Q9NRR8 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE1Q9NRR8 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC10.45□□□□□ -0.74
CDC42SE1Q9NRR8 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC10.45□□□□□ -0.74
CDC42SE1Q9NRR8 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE1Q9NRR8 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE1Q9NRR8 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE1Q9NRR8 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC10.45□□□□□ -0.74
CDC42SE1Q9NRR8 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE1Q9NRR8 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE1Q9NRR8 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE1Q9NRR8 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE1Q9NRR8 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE1Q9NRR8 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE1Q9NRR8 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE1Q9NRR8 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE1Q9NRR8 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC10.45□□□□□ -0.74
CDC42SE1Q9NRR8 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC10.45□□□□□ -0.74
CDC42SE1Q9NRR8 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE1Q9NRR8 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE1Q9NRR8 AC087742.1-201ENST00000575880 1738 ntBASIC10.44□□□□□ -0.74
CDC42SE1Q9NRR8 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC10.44□□□□□ -0.74
CDC42SE1Q9NRR8 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE1Q9NRR8 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC10.44□□□□□ -0.74
CDC42SE1Q9NRR8 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE1Q9NRR8 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE1Q9NRR8 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE1Q9NRR8 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
CDC42SE1Q9NRR8 PTGES2-AS1-201ENST00000443493 2100 ntBASIC10.44□□□□□ -0.74
CDC42SE1Q9NRR8 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC10.44□□□□□ -0.74
CDC42SE1Q9NRR8 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE1Q9NRR8 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE1Q9NRR8 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC10.44□□□□□ -0.74
CDC42SE1Q9NRR8 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE1Q9NRR8 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE1Q9NRR8 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC10.44□□□□□ -0.74
CDC42SE1Q9NRR8 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
CDC42SE1Q9NRR8 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE1Q9NRR8 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE1Q9NRR8 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE1Q9NRR8 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE1Q9NRR8 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE1Q9NRR8 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE1Q9NRR8 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE1Q9NRR8 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE1Q9NRR8 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE1Q9NRR8 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE1Q9NRR8 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE1Q9NRR8 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC10.44□□□□□ -0.74
CDC42SE1Q9NRR8 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE1Q9NRR8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE1Q9NRR8 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
CDC42SE1Q9NRR8 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC10.44□□□□□ -0.74
CDC42SE1Q9NRR8 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 AC020907.5-201ENST00000624372 1936 ntBASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms