Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMCO4Q9NRQ5 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMCO4Q9NRQ5 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
SMCO4Q9NRQ5 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC15.92■□□□□ 0.14
SMCO4Q9NRQ5 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMCO4Q9NRQ5 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMCO4Q9NRQ5 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
SMCO4Q9NRQ5 NOC2LP2-201ENST00000407594 1944 ntBASIC15.92■□□□□ 0.14
SMCO4Q9NRQ5 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
SMCO4Q9NRQ5 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.92■□□□□ 0.14
SMCO4Q9NRQ5 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMCO4Q9NRQ5 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SMCO4Q9NRQ5 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SMCO4Q9NRQ5 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SMCO4Q9NRQ5 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
SMCO4Q9NRQ5 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
SMCO4Q9NRQ5 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SMCO4Q9NRQ5 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.91■□□□□ 0.14
SMCO4Q9NRQ5 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC15.91■□□□□ 0.14
SMCO4Q9NRQ5 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SMCO4Q9NRQ5 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SMCO4Q9NRQ5 AC012313.1-201ENST00000593393 3059 ntBASIC15.91■□□□□ 0.14
SMCO4Q9NRQ5 PKD1P1-201ENST00000458669 6805 ntBASIC15.91■□□□□ 0.14
SMCO4Q9NRQ5 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SMCO4Q9NRQ5 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SMCO4Q9NRQ5 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMCO4Q9NRQ5 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.9■□□□□ 0.14
SMCO4Q9NRQ5 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMCO4Q9NRQ5 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMCO4Q9NRQ5 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC15.9■□□□□ 0.14
SMCO4Q9NRQ5 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
SMCO4Q9NRQ5 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMCO4Q9NRQ5 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SMCO4Q9NRQ5 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMCO4Q9NRQ5 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC15.9■□□□□ 0.14
SMCO4Q9NRQ5 RNF166-209ENST00000567844 633 ntTSL 5 BASIC15.9■□□□□ 0.14
SMCO4Q9NRQ5 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMCO4Q9NRQ5 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMCO4Q9NRQ5 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.9■□□□□ 0.14
SMCO4Q9NRQ5 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SMCO4Q9NRQ5 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMCO4Q9NRQ5 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SMCO4Q9NRQ5 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SMCO4Q9NRQ5 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
SMCO4Q9NRQ5 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMCO4Q9NRQ5 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SMCO4Q9NRQ5 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMCO4Q9NRQ5 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMCO4Q9NRQ5 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.14
SMCO4Q9NRQ5 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMCO4Q9NRQ5 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SMCO4Q9NRQ5 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
SMCO4Q9NRQ5 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMCO4Q9NRQ5 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMCO4Q9NRQ5 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC15.89■□□□□ 0.13
SMCO4Q9NRQ5 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.89■□□□□ 0.13
SMCO4Q9NRQ5 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMCO4Q9NRQ5 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC15.89■□□□□ 0.13
SMCO4Q9NRQ5 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMCO4Q9NRQ5 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMCO4Q9NRQ5 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
SMCO4Q9NRQ5 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMCO4Q9NRQ5 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC15.89■□□□□ 0.13
SMCO4Q9NRQ5 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMCO4Q9NRQ5 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMCO4Q9NRQ5 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SMCO4Q9NRQ5 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC15.89■□□□□ 0.13
SMCO4Q9NRQ5 DUX4L11-201ENST00000611504 1267 ntBASIC15.89■□□□□ 0.13
SMCO4Q9NRQ5 DUX4L12-201ENST00000614593 1267 ntBASIC15.89■□□□□ 0.13
SMCO4Q9NRQ5 DUX4L14-201ENST00000621227 1267 ntBASIC15.89■□□□□ 0.13
SMCO4Q9NRQ5 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SMCO4Q9NRQ5 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC15.89■□□□□ 0.13
SMCO4Q9NRQ5 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.89■□□□□ 0.13
SMCO4Q9NRQ5 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMCO4Q9NRQ5 REST-210ENST00000638187 1334 ntTSL 5 BASIC15.89■□□□□ 0.13
SMCO4Q9NRQ5 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMCO4Q9NRQ5 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.89■□□□□ 0.13
SMCO4Q9NRQ5 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
SMCO4Q9NRQ5 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SMCO4Q9NRQ5 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SMCO4Q9NRQ5 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SMCO4Q9NRQ5 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SMCO4Q9NRQ5 AC139713.2-201ENST00000641328 2723 ntBASIC15.88■□□□□ 0.13
SMCO4Q9NRQ5 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMCO4Q9NRQ5 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMCO4Q9NRQ5 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMCO4Q9NRQ5 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
SMCO4Q9NRQ5 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMCO4Q9NRQ5 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC15.88■□□□□ 0.13
SMCO4Q9NRQ5 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMCO4Q9NRQ5 MOB2-207ENST00000614710 705 ntTSL 5 BASIC15.88■□□□□ 0.13
SMCO4Q9NRQ5 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SMCO4Q9NRQ5 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SMCO4Q9NRQ5 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMCO4Q9NRQ5 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMCO4Q9NRQ5 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SMCO4Q9NRQ5 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
SMCO4Q9NRQ5 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMCO4Q9NRQ5 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
SMCO4Q9NRQ5 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms