Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
RTN4Q9NQC3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RTN4Q9NQC3 AC009299.2-201ENST00000482477 511 ntBASIC23.68■■□□□ 1.38
RTN4Q9NQC3 AL117332.1-201ENST00000622628 974 ntBASIC23.68■■□□□ 1.38
RTN4Q9NQC3 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RTN4Q9NQC3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
RTN4Q9NQC3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC23.68■■□□□ 1.38
RTN4Q9NQC3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RTN4Q9NQC3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RTN4Q9NQC3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.68■■□□□ 1.38
RTN4Q9NQC3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RTN4Q9NQC3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC23.68■■□□□ 1.38
RTN4Q9NQC3 AC090340.1-201ENST00000620778 4980 ntBASIC23.68■■□□□ 1.38
RTN4Q9NQC3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.67■■□□□ 1.38
RTN4Q9NQC3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RTN4Q9NQC3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTN4Q9NQC3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTN4Q9NQC3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
RTN4Q9NQC3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTN4Q9NQC3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTN4Q9NQC3 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RTN4Q9NQC3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTN4Q9NQC3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
RTN4Q9NQC3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTN4Q9NQC3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTN4Q9NQC3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
RTN4Q9NQC3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
RTN4Q9NQC3 MIR6724-1-201ENST00000616420 92 ntBASIC23.67■■□□□ 1.38
RTN4Q9NQC3 MIR6724-2-201ENST00000616483 92 ntBASIC23.67■■□□□ 1.38
RTN4Q9NQC3 MIR6724-4-201ENST00000617390 92 ntBASIC23.67■■□□□ 1.38
RTN4Q9NQC3 MIR6724-3-201ENST00000622482 92 ntBASIC23.67■■□□□ 1.38
RTN4Q9NQC3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTN4Q9NQC3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.67■■□□□ 1.38
RTN4Q9NQC3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTN4Q9NQC3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC23.67■■□□□ 1.38
RTN4Q9NQC3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
RTN4Q9NQC3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
RTN4Q9NQC3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RTN4Q9NQC3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC23.66■■□□□ 1.38
RTN4Q9NQC3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RTN4Q9NQC3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
RTN4Q9NQC3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RTN4Q9NQC3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RTN4Q9NQC3 AC079089.2-201ENST00000531211 1277 ntBASIC23.66■■□□□ 1.38
RTN4Q9NQC3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RTN4Q9NQC3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
RTN4Q9NQC3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
RTN4Q9NQC3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
RTN4Q9NQC3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RTN4Q9NQC3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
RTN4Q9NQC3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
RTN4Q9NQC3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
RTN4Q9NQC3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTN4Q9NQC3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTN4Q9NQC3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC23.65■■□□□ 1.38
RTN4Q9NQC3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RTN4Q9NQC3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTN4Q9NQC3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.65■■□□□ 1.38
RTN4Q9NQC3 UNC93B8-201ENST00000511903 705 ntBASIC23.65■■□□□ 1.38
RTN4Q9NQC3 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC23.65■■□□□ 1.38
RTN4Q9NQC3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.65■■□□□ 1.38
RTN4Q9NQC3 AL451085.2-201ENST00000605085 799 ntBASIC23.65■■□□□ 1.38
RTN4Q9NQC3 AC241377.3-202ENST00000626088 1088 ntBASIC23.65■■□□□ 1.38
RTN4Q9NQC3 AC241585.3-202ENST00000628937 1088 ntBASIC23.65■■□□□ 1.38
RTN4Q9NQC3 AC245100.8-202ENST00000629247 1058 ntBASIC23.65■■□□□ 1.38
RTN4Q9NQC3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTN4Q9NQC3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTN4Q9NQC3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.65■■□□□ 1.38
RTN4Q9NQC3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTN4Q9NQC3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTN4Q9NQC3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTN4Q9NQC3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTN4Q9NQC3 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC23.65■■□□□ 1.38
RTN4Q9NQC3 AC026471.6-201ENST00000622954 1905 ntBASIC23.65■■□□□ 1.38
RTN4Q9NQC3 AC133637.1-201ENST00000624115 1537 ntBASIC23.64■■□□□ 1.38
RTN4Q9NQC3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
RTN4Q9NQC3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.38
RTN4Q9NQC3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
RTN4Q9NQC3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
RTN4Q9NQC3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
RTN4Q9NQC3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.64■■□□□ 1.37
RTN4Q9NQC3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
RTN4Q9NQC3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.64■■□□□ 1.37
RTN4Q9NQC3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC23.64■■□□□ 1.37
RTN4Q9NQC3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RTN4Q9NQC3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RTN4Q9NQC3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RTN4Q9NQC3 AC027702.1-201ENST00000563810 1770 ntBASIC23.63■■□□□ 1.37
RTN4Q9NQC3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC23.63■■□□□ 1.37
RTN4Q9NQC3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RTN4Q9NQC3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC23.63■■□□□ 1.37
RTN4Q9NQC3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.63■■□□□ 1.37
RTN4Q9NQC3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.63■■□□□ 1.37
RTN4Q9NQC3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.63■■□□□ 1.37
RTN4Q9NQC3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.63■■□□□ 1.37
RTN4Q9NQC3 AC104581.1-202ENST00000635932 2618 ntBASIC23.63■■□□□ 1.37
RTN4Q9NQC3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RTN4Q9NQC3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RTN4Q9NQC3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
RTN4Q9NQC3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms