Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
C12orf4Q9NQ89 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.48■□□□□ 0.39
C12orf4Q9NQ89 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.48■□□□□ 0.39
C12orf4Q9NQ89 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
C12orf4Q9NQ89 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
C12orf4Q9NQ89 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
C12orf4Q9NQ89 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
C12orf4Q9NQ89 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
C12orf4Q9NQ89 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
C12orf4Q9NQ89 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
C12orf4Q9NQ89 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
C12orf4Q9NQ89 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
C12orf4Q9NQ89 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
C12orf4Q9NQ89 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
C12orf4Q9NQ89 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
C12orf4Q9NQ89 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
C12orf4Q9NQ89 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.47■□□□□ 0.39
C12orf4Q9NQ89 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
C12orf4Q9NQ89 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
C12orf4Q9NQ89 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
C12orf4Q9NQ89 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
C12orf4Q9NQ89 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
C12orf4Q9NQ89 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
C12orf4Q9NQ89 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.47■□□□□ 0.39
C12orf4Q9NQ89 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
C12orf4Q9NQ89 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.47■□□□□ 0.39
C12orf4Q9NQ89 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
C12orf4Q9NQ89 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
C12orf4Q9NQ89 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
C12orf4Q9NQ89 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
C12orf4Q9NQ89 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
C12orf4Q9NQ89 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
C12orf4Q9NQ89 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.47■□□□□ 0.39
C12orf4Q9NQ89 AC027682.1-201ENST00000562846 899 ntBASIC17.47■□□□□ 0.39
C12orf4Q9NQ89 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.47■□□□□ 0.39
C12orf4Q9NQ89 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
C12orf4Q9NQ89 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
C12orf4Q9NQ89 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
C12orf4Q9NQ89 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.47■□□□□ 0.39
C12orf4Q9NQ89 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
C12orf4Q9NQ89 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
C12orf4Q9NQ89 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.47■□□□□ 0.39
C12orf4Q9NQ89 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
C12orf4Q9NQ89 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
C12orf4Q9NQ89 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.47■□□□□ 0.39
C12orf4Q9NQ89 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
C12orf4Q9NQ89 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
C12orf4Q9NQ89 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
C12orf4Q9NQ89 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
C12orf4Q9NQ89 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.46■□□□□ 0.39
C12orf4Q9NQ89 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
C12orf4Q9NQ89 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
C12orf4Q9NQ89 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
C12orf4Q9NQ89 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
C12orf4Q9NQ89 AC098818.2-201ENST00000564925 2320 ntBASIC17.46■□□□□ 0.39
C12orf4Q9NQ89 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
C12orf4Q9NQ89 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
C12orf4Q9NQ89 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
C12orf4Q9NQ89 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
C12orf4Q9NQ89 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.46■□□□□ 0.39
C12orf4Q9NQ89 AC008764.7-201ENST00000593779 1081 ntBASIC17.46■□□□□ 0.39
C12orf4Q9NQ89 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.46■□□□□ 0.39
C12orf4Q9NQ89 BX005040.4-201ENST00000637145 1518 ntBASIC17.46■□□□□ 0.39
C12orf4Q9NQ89 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
C12orf4Q9NQ89 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
C12orf4Q9NQ89 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
C12orf4Q9NQ89 AC007225.1-201ENST00000566331 1836 ntBASIC17.45■□□□□ 0.38
C12orf4Q9NQ89 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
C12orf4Q9NQ89 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
C12orf4Q9NQ89 AFG3L1P-217ENST00000557444 2447 ntBASIC17.45■□□□□ 0.38
C12orf4Q9NQ89 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
C12orf4Q9NQ89 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.45■□□□□ 0.38
C12orf4Q9NQ89 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.45■□□□□ 0.38
C12orf4Q9NQ89 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.45■□□□□ 0.38
C12orf4Q9NQ89 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.45■□□□□ 0.38
C12orf4Q9NQ89 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.45■□□□□ 0.38
C12orf4Q9NQ89 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.45■□□□□ 0.38
C12orf4Q9NQ89 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
C12orf4Q9NQ89 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
C12orf4Q9NQ89 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
C12orf4Q9NQ89 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
C12orf4Q9NQ89 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
C12orf4Q9NQ89 AC005332.8-201ENST00000622750 2735 ntBASIC17.45■□□□□ 0.38
C12orf4Q9NQ89 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
C12orf4Q9NQ89 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.45■□□□□ 0.38
C12orf4Q9NQ89 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
C12orf4Q9NQ89 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
C12orf4Q9NQ89 TSPY26P-201ENST00000476365 1326 ntBASIC17.45■□□□□ 0.38
C12orf4Q9NQ89 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
C12orf4Q9NQ89 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
C12orf4Q9NQ89 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
C12orf4Q9NQ89 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
C12orf4Q9NQ89 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
C12orf4Q9NQ89 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.44■□□□□ 0.38
C12orf4Q9NQ89 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.44■□□□□ 0.38
C12orf4Q9NQ89 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
C12orf4Q9NQ89 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
C12orf4Q9NQ89 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
C12orf4Q9NQ89 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.44■□□□□ 0.38
C12orf4Q9NQ89 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms