Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMG20AQ9NP66 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HMG20AQ9NP66 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HMG20AQ9NP66 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMG20AQ9NP66 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HMG20AQ9NP66 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
HMG20AQ9NP66 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMG20AQ9NP66 OR7E47P-201ENST00000546390 1422 ntBASIC18.32■□□□□ 0.52
HMG20AQ9NP66 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
HMG20AQ9NP66 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMG20AQ9NP66 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HMG20AQ9NP66 AC125437.2-201ENST00000625180 2167 ntBASIC18.31■□□□□ 0.52
HMG20AQ9NP66 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.31■□□□□ 0.52
HMG20AQ9NP66 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.31■□□□□ 0.52
HMG20AQ9NP66 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.31■□□□□ 0.52
HMG20AQ9NP66 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMG20AQ9NP66 SERBP1P1-201ENST00000396021 1160 ntBASIC18.31■□□□□ 0.52
HMG20AQ9NP66 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMG20AQ9NP66 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HMG20AQ9NP66 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HMG20AQ9NP66 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.31■□□□□ 0.52
HMG20AQ9NP66 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HMG20AQ9NP66 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMG20AQ9NP66 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMG20AQ9NP66 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HMG20AQ9NP66 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMG20AQ9NP66 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.31■□□□□ 0.52
HMG20AQ9NP66 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HMG20AQ9NP66 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
HMG20AQ9NP66 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMG20AQ9NP66 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMG20AQ9NP66 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.3■□□□□ 0.52
HMG20AQ9NP66 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
HMG20AQ9NP66 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HMG20AQ9NP66 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.3■□□□□ 0.52
HMG20AQ9NP66 AC020916.1-201ENST00000587762 1774 ntBASIC18.3■□□□□ 0.52
HMG20AQ9NP66 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMG20AQ9NP66 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.3■□□□□ 0.52
HMG20AQ9NP66 AC007613.1-201ENST00000572811 2597 ntBASIC18.3■□□□□ 0.52
HMG20AQ9NP66 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HMG20AQ9NP66 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HMG20AQ9NP66 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.3■□□□□ 0.52
HMG20AQ9NP66 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
HMG20AQ9NP66 AC005332.8-201ENST00000622750 2735 ntBASIC18.3■□□□□ 0.52
HMG20AQ9NP66 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMG20AQ9NP66 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.3■□□□□ 0.52
HMG20AQ9NP66 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMG20AQ9NP66 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
HMG20AQ9NP66 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HMG20AQ9NP66 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMG20AQ9NP66 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
HMG20AQ9NP66 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HMG20AQ9NP66 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMG20AQ9NP66 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMG20AQ9NP66 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
HMG20AQ9NP66 AIRN-201ENST00000601203 4374 ntBASIC18.29■□□□□ 0.52
HMG20AQ9NP66 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMG20AQ9NP66 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMG20AQ9NP66 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.29■□□□□ 0.52
HMG20AQ9NP66 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMG20AQ9NP66 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
HMG20AQ9NP66 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.29■□□□□ 0.52
HMG20AQ9NP66 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.29■□□□□ 0.52
HMG20AQ9NP66 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.29■□□□□ 0.52
HMG20AQ9NP66 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.29■□□□□ 0.52
HMG20AQ9NP66 AC087239.1-201ENST00000622671 572 ntBASIC18.29■□□□□ 0.52
HMG20AQ9NP66 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.29■□□□□ 0.52
HMG20AQ9NP66 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMG20AQ9NP66 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.29■□□□□ 0.52
HMG20AQ9NP66 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMG20AQ9NP66 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
HMG20AQ9NP66 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMG20AQ9NP66 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HMG20AQ9NP66 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMG20AQ9NP66 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMG20AQ9NP66 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMG20AQ9NP66 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMG20AQ9NP66 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMG20AQ9NP66 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
HMG20AQ9NP66 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
HMG20AQ9NP66 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.28■□□□□ 0.52
HMG20AQ9NP66 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HMG20AQ9NP66 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
HMG20AQ9NP66 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMG20AQ9NP66 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.28■□□□□ 0.52
HMG20AQ9NP66 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMG20AQ9NP66 AC010525.1-201ENST00000585559 441 ntBASIC18.28■□□□□ 0.52
HMG20AQ9NP66 AC011298.3-201ENST00000615796 283 ntBASIC18.28■□□□□ 0.52
HMG20AQ9NP66 AC136469.2-201ENST00000623944 1028 ntBASIC18.28■□□□□ 0.52
HMG20AQ9NP66 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMG20AQ9NP66 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMG20AQ9NP66 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMG20AQ9NP66 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
HMG20AQ9NP66 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
HMG20AQ9NP66 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMG20AQ9NP66 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMG20AQ9NP66 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HMG20AQ9NP66 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HMG20AQ9NP66 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
HMG20AQ9NP66 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms