Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
VCX3AQ9NNX9 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
VCX3AQ9NNX9 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VCX3AQ9NNX9 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VCX3AQ9NNX9 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
VCX3AQ9NNX9 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VCX3AQ9NNX9 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
VCX3AQ9NNX9 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
VCX3AQ9NNX9 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.87■□□□□ 0.61
VCX3AQ9NNX9 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
VCX3AQ9NNX9 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VCX3AQ9NNX9 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
VCX3AQ9NNX9 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VCX3AQ9NNX9 AC139795.1-202ENST00000500444 432 ntBASIC18.87■□□□□ 0.61
VCX3AQ9NNX9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.87■□□□□ 0.61
VCX3AQ9NNX9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.87■□□□□ 0.61
VCX3AQ9NNX9 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VCX3AQ9NNX9 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
VCX3AQ9NNX9 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
VCX3AQ9NNX9 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.87■□□□□ 0.61
VCX3AQ9NNX9 PKD1P1-201ENST00000458669 6805 ntBASIC18.86■□□□□ 0.61
VCX3AQ9NNX9 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCX3AQ9NNX9 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCX3AQ9NNX9 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCX3AQ9NNX9 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.86■□□□□ 0.61
VCX3AQ9NNX9 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
VCX3AQ9NNX9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.86■□□□□ 0.61
VCX3AQ9NNX9 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCX3AQ9NNX9 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.86■□□□□ 0.61
VCX3AQ9NNX9 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCX3AQ9NNX9 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.86■□□□□ 0.61
VCX3AQ9NNX9 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.86■□□□□ 0.61
VCX3AQ9NNX9 AC003102.1-202ENST00000563394 1796 ntBASIC18.86■□□□□ 0.61
VCX3AQ9NNX9 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCX3AQ9NNX9 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.86■□□□□ 0.61
VCX3AQ9NNX9 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.86■□□□□ 0.61
VCX3AQ9NNX9 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCX3AQ9NNX9 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VCX3AQ9NNX9 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.86■□□□□ 0.61
VCX3AQ9NNX9 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCX3AQ9NNX9 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCX3AQ9NNX9 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.86■□□□□ 0.61
VCX3AQ9NNX9 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VCX3AQ9NNX9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.86■□□□□ 0.61
VCX3AQ9NNX9 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.86■□□□□ 0.61
VCX3AQ9NNX9 AL138781.2-201ENST00000617896 1843 ntBASIC18.86■□□□□ 0.61
VCX3AQ9NNX9 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCX3AQ9NNX9 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCX3AQ9NNX9 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCX3AQ9NNX9 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
VCX3AQ9NNX9 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
VCX3AQ9NNX9 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
VCX3AQ9NNX9 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
VCX3AQ9NNX9 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.85■□□□□ 0.61
VCX3AQ9NNX9 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCX3AQ9NNX9 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCX3AQ9NNX9 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VCX3AQ9NNX9 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.85■□□□□ 0.61
VCX3AQ9NNX9 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCX3AQ9NNX9 MIR639-201ENST00000384974 98 ntBASIC18.85■□□□□ 0.61
VCX3AQ9NNX9 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCX3AQ9NNX9 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCX3AQ9NNX9 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCX3AQ9NNX9 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCX3AQ9NNX9 AL133373.2-201ENST00000623187 2828 ntBASIC18.85■□□□□ 0.61
VCX3AQ9NNX9 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCX3AQ9NNX9 AP004607.7-201ENST00000527152 1677 ntBASIC18.85■□□□□ 0.61
VCX3AQ9NNX9 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCX3AQ9NNX9 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCX3AQ9NNX9 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCX3AQ9NNX9 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCX3AQ9NNX9 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.85■□□□□ 0.61
VCX3AQ9NNX9 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.84■□□□□ 0.61
VCX3AQ9NNX9 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCX3AQ9NNX9 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCX3AQ9NNX9 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCX3AQ9NNX9 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCX3AQ9NNX9 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCX3AQ9NNX9 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCX3AQ9NNX9 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCX3AQ9NNX9 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCX3AQ9NNX9 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.84■□□□□ 0.61
VCX3AQ9NNX9 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCX3AQ9NNX9 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
VCX3AQ9NNX9 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCX3AQ9NNX9 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VCX3AQ9NNX9 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.84■□□□□ 0.61
VCX3AQ9NNX9 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
VCX3AQ9NNX9 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VCX3AQ9NNX9 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCX3AQ9NNX9 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VCX3AQ9NNX9 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCX3AQ9NNX9 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.84■□□□□ 0.61
VCX3AQ9NNX9 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCX3AQ9NNX9 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCX3AQ9NNX9 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCX3AQ9NNX9 TCF3P1-201ENST00000423021 1937 ntBASIC18.84■□□□□ 0.61
VCX3AQ9NNX9 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VCX3AQ9NNX9 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.84■□□□□ 0.61
VCX3AQ9NNX9 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms