Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRF2Q9HAW0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
BRF2Q9HAW0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.36■□□□□ 0.69
BRF2Q9HAW0 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRF2Q9HAW0 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.36■□□□□ 0.69
BRF2Q9HAW0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.35■□□□□ 0.69
BRF2Q9HAW0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRF2Q9HAW0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.35■□□□□ 0.69
BRF2Q9HAW0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.35■□□□□ 0.69
BRF2Q9HAW0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRF2Q9HAW0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
BRF2Q9HAW0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.35■□□□□ 0.69
BRF2Q9HAW0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BRF2Q9HAW0 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRF2Q9HAW0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRF2Q9HAW0 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BRF2Q9HAW0 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BRF2Q9HAW0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.35■□□□□ 0.69
BRF2Q9HAW0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.35■□□□□ 0.69
BRF2Q9HAW0 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.35■□□□□ 0.69
BRF2Q9HAW0 AL391422.3-201ENST00000603791 2761 ntBASIC19.35■□□□□ 0.69
BRF2Q9HAW0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRF2Q9HAW0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRF2Q9HAW0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRF2Q9HAW0 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
BRF2Q9HAW0 AC007322.1-201ENST00000426983 750 ntBASIC19.34■□□□□ 0.69
BRF2Q9HAW0 CYP2T1P-201ENST00000432607 1285 ntBASIC19.34■□□□□ 0.69
BRF2Q9HAW0 AC022517.1-201ENST00000592429 346 ntBASIC19.34■□□□□ 0.69
BRF2Q9HAW0 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.34■□□□□ 0.69
BRF2Q9HAW0 AC008694.1-202ENST00000636953 945 ntBASIC19.34■□□□□ 0.69
BRF2Q9HAW0 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
BRF2Q9HAW0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
BRF2Q9HAW0 AC112907.3-201ENST00000577781 2400 ntBASIC19.34■□□□□ 0.69
BRF2Q9HAW0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRF2Q9HAW0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.34■□□□□ 0.69
BRF2Q9HAW0 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
BRF2Q9HAW0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
BRF2Q9HAW0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.33■□□□□ 0.69
BRF2Q9HAW0 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
BRF2Q9HAW0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.33■□□□□ 0.69
BRF2Q9HAW0 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
BRF2Q9HAW0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.33■□□□□ 0.69
BRF2Q9HAW0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BRF2Q9HAW0 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BRF2Q9HAW0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.33■□□□□ 0.68
BRF2Q9HAW0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BRF2Q9HAW0 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.33■□□□□ 0.68
BRF2Q9HAW0 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
BRF2Q9HAW0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BRF2Q9HAW0 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BRF2Q9HAW0 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
BRF2Q9HAW0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BRF2Q9HAW0 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
BRF2Q9HAW0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.33■□□□□ 0.68
BRF2Q9HAW0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
BRF2Q9HAW0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.33■□□□□ 0.68
BRF2Q9HAW0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BRF2Q9HAW0 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BRF2Q9HAW0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BRF2Q9HAW0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BRF2Q9HAW0 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BRF2Q9HAW0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
BRF2Q9HAW0 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BRF2Q9HAW0 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
BRF2Q9HAW0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.32■□□□□ 0.68
BRF2Q9HAW0 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.32■□□□□ 0.68
BRF2Q9HAW0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
BRF2Q9HAW0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
BRF2Q9HAW0 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.32■□□□□ 0.68
BRF2Q9HAW0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.32■□□□□ 0.68
BRF2Q9HAW0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.32■□□□□ 0.68
BRF2Q9HAW0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BRF2Q9HAW0 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
BRF2Q9HAW0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.32■□□□□ 0.68
BRF2Q9HAW0 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
BRF2Q9HAW0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
BRF2Q9HAW0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.32■□□□□ 0.68
BRF2Q9HAW0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
BRF2Q9HAW0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
BRF2Q9HAW0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BRF2Q9HAW0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BRF2Q9HAW0 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BRF2Q9HAW0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
BRF2Q9HAW0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
BRF2Q9HAW0 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BRF2Q9HAW0 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.31■□□□□ 0.68
BRF2Q9HAW0 KRT18P68-201ENST00000392293 1000 ntBASIC19.31■□□□□ 0.68
BRF2Q9HAW0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.31■□□□□ 0.68
BRF2Q9HAW0 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.31■□□□□ 0.68
BRF2Q9HAW0 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
BRF2Q9HAW0 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.31■□□□□ 0.68
BRF2Q9HAW0 AC105020.6-201ENST00000621523 1217 ntBASIC19.31■□□□□ 0.68
BRF2Q9HAW0 OR10C1-204ENST00000622521 1039 ntBASIC19.31■□□□□ 0.68
BRF2Q9HAW0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
BRF2Q9HAW0 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
BRF2Q9HAW0 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BRF2Q9HAW0 BX119927.1-201ENST00000636596 1552 ntBASIC19.31■□□□□ 0.68
BRF2Q9HAW0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.31■□□□□ 0.68
BRF2Q9HAW0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.31■□□□□ 0.68
BRF2Q9HAW0 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms