Protein–RNA interactions for Protein: Q9H239

MMP28, Matrix metalloproteinase-28, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28Q9H239 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
MMP28Q9H239 RARRES2P6-201ENST00000567333 442 ntBASIC17.77■□□□□ 0.44
MMP28Q9H239 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.77■□□□□ 0.44
MMP28Q9H239 AC233992.3-201ENST00000607491 485 ntBASIC17.77■□□□□ 0.44
MMP28Q9H239 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.77■□□□□ 0.44
MMP28Q9H239 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.77■□□□□ 0.44
MMP28Q9H239 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
MMP28Q9H239 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
MMP28Q9H239 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
MMP28Q9H239 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
MMP28Q9H239 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
MMP28Q9H239 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.77■□□□□ 0.43
MMP28Q9H239 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
MMP28Q9H239 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
MMP28Q9H239 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
MMP28Q9H239 AC120498.9-201ENST00000339021 3867 ntBASIC17.76■□□□□ 0.43
MMP28Q9H239 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP28Q9H239 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
MMP28Q9H239 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.76■□□□□ 0.43
MMP28Q9H239 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP28Q9H239 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP28Q9H239 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MMP28Q9H239 AC005332.7-201ENST00000614046 2005 ntBASIC17.76■□□□□ 0.43
MMP28Q9H239 FP700111.2-201ENST00000619190 1892 ntBASIC17.76■□□□□ 0.43
MMP28Q9H239 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
MMP28Q9H239 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP28Q9H239 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP28Q9H239 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP28Q9H239 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
MMP28Q9H239 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
MMP28Q9H239 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP28Q9H239 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP28Q9H239 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.76■□□□□ 0.43
MMP28Q9H239 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
MMP28Q9H239 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MMP28Q9H239 AL355001.2-201ENST00000620617 1191 ntBASIC17.76■□□□□ 0.43
MMP28Q9H239 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP28Q9H239 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP28Q9H239 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP28Q9H239 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.76■□□□□ 0.43
MMP28Q9H239 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.76■□□□□ 0.43
MMP28Q9H239 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP28Q9H239 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
MMP28Q9H239 FZD10-202ENST00000539839 3282 ntBASIC17.75■□□□□ 0.43
MMP28Q9H239 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP28Q9H239 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP28Q9H239 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
MMP28Q9H239 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.75■□□□□ 0.43
MMP28Q9H239 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
MMP28Q9H239 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP28Q9H239 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP28Q9H239 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.75■□□□□ 0.43
MMP28Q9H239 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
MMP28Q9H239 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MMP28Q9H239 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.75■□□□□ 0.43
MMP28Q9H239 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
MMP28Q9H239 AC027682.1-201ENST00000562846 899 ntBASIC17.75■□□□□ 0.43
MMP28Q9H239 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP28Q9H239 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP28Q9H239 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP28Q9H239 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
MMP28Q9H239 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP28Q9H239 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.75■□□□□ 0.43
MMP28Q9H239 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP28Q9H239 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.75■□□□□ 0.43
MMP28Q9H239 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.74■□□□□ 0.43
MMP28Q9H239 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP28Q9H239 AC138932.1-201ENST00000534164 6830 ntBASIC17.74■□□□□ 0.43
MMP28Q9H239 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MMP28Q9H239 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
MMP28Q9H239 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.74■□□□□ 0.43
MMP28Q9H239 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.74■□□□□ 0.43
MMP28Q9H239 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.74■□□□□ 0.43
MMP28Q9H239 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP28Q9H239 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
MMP28Q9H239 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP28Q9H239 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MMP28Q9H239 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
MMP28Q9H239 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.74■□□□□ 0.43
MMP28Q9H239 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP28Q9H239 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP28Q9H239 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MMP28Q9H239 AC010141.3-201ENST00000456659 717 ntBASIC17.74■□□□□ 0.43
MMP28Q9H239 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.74■□□□□ 0.43
MMP28Q9H239 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.74■□□□□ 0.43
MMP28Q9H239 AC008764.7-201ENST00000593779 1081 ntBASIC17.74■□□□□ 0.43
MMP28Q9H239 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.74■□□□□ 0.43
MMP28Q9H239 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MMP28Q9H239 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
MMP28Q9H239 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP28Q9H239 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.74■□□□□ 0.43
MMP28Q9H239 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.74■□□□□ 0.43
MMP28Q9H239 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.74■□□□□ 0.43
MMP28Q9H239 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP28Q9H239 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP28Q9H239 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP28Q9H239 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MMP28Q9H239 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.73■□□□□ 0.43
MMP28Q9H239 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
MMP28Q9H239 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms