Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COMMD4Q9H0A8 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COMMD4Q9H0A8 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.82■□□□□ 0.44
COMMD4Q9H0A8 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.82■□□□□ 0.44
COMMD4Q9H0A8 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.82■□□□□ 0.44
COMMD4Q9H0A8 SUDS3P1-201ENST00000505831 966 ntBASIC17.82■□□□□ 0.44
COMMD4Q9H0A8 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COMMD4Q9H0A8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
COMMD4Q9H0A8 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COMMD4Q9H0A8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COMMD4Q9H0A8 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
COMMD4Q9H0A8 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COMMD4Q9H0A8 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.82■□□□□ 0.44
COMMD4Q9H0A8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COMMD4Q9H0A8 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
COMMD4Q9H0A8 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COMMD4Q9H0A8 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
COMMD4Q9H0A8 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COMMD4Q9H0A8 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
COMMD4Q9H0A8 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COMMD4Q9H0A8 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.81■□□□□ 0.44
COMMD4Q9H0A8 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COMMD4Q9H0A8 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
COMMD4Q9H0A8 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.81■□□□□ 0.44
COMMD4Q9H0A8 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.81■□□□□ 0.44
COMMD4Q9H0A8 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
COMMD4Q9H0A8 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COMMD4Q9H0A8 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
COMMD4Q9H0A8 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
COMMD4Q9H0A8 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COMMD4Q9H0A8 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
COMMD4Q9H0A8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COMMD4Q9H0A8 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
COMMD4Q9H0A8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.81■□□□□ 0.44
COMMD4Q9H0A8 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COMMD4Q9H0A8 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.81■□□□□ 0.44
COMMD4Q9H0A8 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
COMMD4Q9H0A8 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COMMD4Q9H0A8 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COMMD4Q9H0A8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.8■□□□□ 0.44
COMMD4Q9H0A8 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COMMD4Q9H0A8 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COMMD4Q9H0A8 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
COMMD4Q9H0A8 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COMMD4Q9H0A8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
COMMD4Q9H0A8 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
COMMD4Q9H0A8 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
COMMD4Q9H0A8 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.8■□□□□ 0.44
COMMD4Q9H0A8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.8■□□□□ 0.44
COMMD4Q9H0A8 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.8■□□□□ 0.44
COMMD4Q9H0A8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.8■□□□□ 0.44
COMMD4Q9H0A8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.8■□□□□ 0.44
COMMD4Q9H0A8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.8■□□□□ 0.44
COMMD4Q9H0A8 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COMMD4Q9H0A8 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.8■□□□□ 0.44
COMMD4Q9H0A8 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.8■□□□□ 0.44
COMMD4Q9H0A8 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.8■□□□□ 0.44
COMMD4Q9H0A8 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COMMD4Q9H0A8 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.8■□□□□ 0.44
COMMD4Q9H0A8 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
COMMD4Q9H0A8 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
COMMD4Q9H0A8 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
COMMD4Q9H0A8 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COMMD4Q9H0A8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
COMMD4Q9H0A8 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
COMMD4Q9H0A8 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COMMD4Q9H0A8 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COMMD4Q9H0A8 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.79■□□□□ 0.44
COMMD4Q9H0A8 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
COMMD4Q9H0A8 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.79■□□□□ 0.44
COMMD4Q9H0A8 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
COMMD4Q9H0A8 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.79■□□□□ 0.44
COMMD4Q9H0A8 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
COMMD4Q9H0A8 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.79■□□□□ 0.44
COMMD4Q9H0A8 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
COMMD4Q9H0A8 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COMMD4Q9H0A8 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.79■□□□□ 0.44
COMMD4Q9H0A8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COMMD4Q9H0A8 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COMMD4Q9H0A8 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COMMD4Q9H0A8 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COMMD4Q9H0A8 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
COMMD4Q9H0A8 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
COMMD4Q9H0A8 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COMMD4Q9H0A8 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COMMD4Q9H0A8 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
COMMD4Q9H0A8 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
COMMD4Q9H0A8 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.78■□□□□ 0.44
COMMD4Q9H0A8 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COMMD4Q9H0A8 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COMMD4Q9H0A8 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COMMD4Q9H0A8 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
COMMD4Q9H0A8 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.78■□□□□ 0.44
COMMD4Q9H0A8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.78■□□□□ 0.44
COMMD4Q9H0A8 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COMMD4Q9H0A8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COMMD4Q9H0A8 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.78■□□□□ 0.44
COMMD4Q9H0A8 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
COMMD4Q9H0A8 AC010141.2-201ENST00000452426 721 ntBASIC17.78■□□□□ 0.44
COMMD4Q9H0A8 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms