Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 MTATP6P23-201ENST00000440153 476 ntBASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 MTND1P33-201ENST00000446251 917 ntBASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 OR6C72P-201ENST00000451403 892 ntBASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 CDY23P-201ENST00000451661 1014 ntBASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 AC096659.1-201ENST00000456728 549 ntTSL 2 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 OR9M1P-201ENST00000459641 921 ntBASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 RPL7P42-201ENST00000481005 679 ntBASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 ST13P12-201ENST00000508958 1094 ntBASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 AC080079.1-201ENST00000509326 1045 ntBASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 AC124947.1-201ENST00000552835 814 ntTSL 3 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 AP003096.1-201ENST00000565199 503 ntTSL 3 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 VN1R92P-201ENST00000598511 928 ntBASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 AC121493.1-201ENST00000602316 450 ntBASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 AC024451.4-201ENST00000602578 752 ntBASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 AC040174.2-201ENST00000602701 465 ntBASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 AC069304.3-201ENST00000603938 1084 ntBASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 AC010245.2-201ENST00000606908 1167 ntBASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 AL365330.1-201ENST00000607459 531 ntBASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 AP000254.1-201ENST00000609934 520 ntBASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 AC024941.1-201ENST00000612250 334 ntBASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 ZNF365-211ENST00000614806 877 ntTSL 5 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 AC090510.3-201ENST00000615831 821 ntBASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 Metazoa_SRP.60-201ENST00000616888 305 ntBASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 LARS-216ENST00000618084 720 ntTSL 5 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 AC007792.1-201ENST00000623023 402 ntBASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 MTCO1P22-201ENST00000604619 1360 ntBASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 AC008406.3-201ENST00000620001 1374 ntBASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 AL157902.2-201ENST00000623435 1492 ntBASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
KRTAP4-4Q9BYR3 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 FYTTD1-203ENST00000415708 1342 ntTSL 2 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 AC099689.1-201ENST00000624383 1302 ntBASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 AL391380.1-201ENST00000439300 1432 ntBASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 ZNF519P1-201ENST00000449011 1626 ntBASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 TMED6-201ENST00000288025 938 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 SPRR3-201ENST00000295367 878 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 SH2D1A-201ENST00000360027 593 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC4.22□□□□□ -1.73
KRTAP4-4Q9BYR3 TCTE3-201ENST00000366774 769 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms