Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRFN3Q9BTN0 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRFN3Q9BTN0 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LRFN3Q9BTN0 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRFN3Q9BTN0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.39■□□□□ 0.85
LRFN3Q9BTN0 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRFN3Q9BTN0 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
LRFN3Q9BTN0 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRFN3Q9BTN0 AL121749.1-202ENST00000609313 2153 ntBASIC20.38■□□□□ 0.85
LRFN3Q9BTN0 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.38■□□□□ 0.85
LRFN3Q9BTN0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRFN3Q9BTN0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.38■□□□□ 0.85
LRFN3Q9BTN0 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.38■□□□□ 0.85
LRFN3Q9BTN0 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.38■□□□□ 0.85
LRFN3Q9BTN0 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.38■□□□□ 0.85
LRFN3Q9BTN0 AC009078.2-202ENST00000463353 338 ntBASIC20.38■□□□□ 0.85
LRFN3Q9BTN0 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRFN3Q9BTN0 VENTXP5-201ENST00000523979 775 ntBASIC20.38■□□□□ 0.85
LRFN3Q9BTN0 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRFN3Q9BTN0 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.38■□□□□ 0.85
LRFN3Q9BTN0 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
LRFN3Q9BTN0 AC141257.4-201ENST00000634557 245 ntBASIC20.38■□□□□ 0.85
LRFN3Q9BTN0 AC136944.6-201ENST00000634818 245 ntBASIC20.38■□□□□ 0.85
LRFN3Q9BTN0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRFN3Q9BTN0 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.38■□□□□ 0.85
LRFN3Q9BTN0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRFN3Q9BTN0 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.37■□□□□ 0.85
LRFN3Q9BTN0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRFN3Q9BTN0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.37■□□□□ 0.85
LRFN3Q9BTN0 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRFN3Q9BTN0 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
LRFN3Q9BTN0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRFN3Q9BTN0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.37■□□□□ 0.85
LRFN3Q9BTN0 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRFN3Q9BTN0 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRFN3Q9BTN0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRFN3Q9BTN0 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRFN3Q9BTN0 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.37■□□□□ 0.85
LRFN3Q9BTN0 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.37■□□□□ 0.85
LRFN3Q9BTN0 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LRFN3Q9BTN0 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRFN3Q9BTN0 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.37■□□□□ 0.85
LRFN3Q9BTN0 AL136038.3-201ENST00000561909 1096 ntBASIC20.37■□□□□ 0.85
LRFN3Q9BTN0 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRFN3Q9BTN0 MIR3652-201ENST00000579335 131 ntBASIC20.37■□□□□ 0.85
LRFN3Q9BTN0 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRFN3Q9BTN0 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.37■□□□□ 0.85
LRFN3Q9BTN0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
LRFN3Q9BTN0 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.37■□□□□ 0.85
LRFN3Q9BTN0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
LRFN3Q9BTN0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRFN3Q9BTN0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRFN3Q9BTN0 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRFN3Q9BTN0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRFN3Q9BTN0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.37■□□□□ 0.85
LRFN3Q9BTN0 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
LRFN3Q9BTN0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
LRFN3Q9BTN0 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRFN3Q9BTN0 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRFN3Q9BTN0 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRFN3Q9BTN0 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRFN3Q9BTN0 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRFN3Q9BTN0 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.36■□□□□ 0.85
LRFN3Q9BTN0 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
LRFN3Q9BTN0 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.36■□□□□ 0.85
LRFN3Q9BTN0 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRFN3Q9BTN0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.36■□□□□ 0.85
LRFN3Q9BTN0 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.36■□□□□ 0.85
LRFN3Q9BTN0 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
LRFN3Q9BTN0 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.36■□□□□ 0.85
LRFN3Q9BTN0 LINC02084-201ENST00000606069 1096 ntBASIC20.36■□□□□ 0.85
LRFN3Q9BTN0 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRFN3Q9BTN0 AC008622.2-201ENST00000617006 1229 ntBASIC20.36■□□□□ 0.85
LRFN3Q9BTN0 AL031432.5-201ENST00000641059 760 ntBASIC20.36■□□□□ 0.85
LRFN3Q9BTN0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRFN3Q9BTN0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.36■□□□□ 0.85
LRFN3Q9BTN0 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRFN3Q9BTN0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRFN3Q9BTN0 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
LRFN3Q9BTN0 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRFN3Q9BTN0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRFN3Q9BTN0 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
LRFN3Q9BTN0 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC20.35■□□□□ 0.85
LRFN3Q9BTN0 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRFN3Q9BTN0 UNC93B7-201ENST00000509439 705 ntBASIC20.35■□□□□ 0.85
LRFN3Q9BTN0 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRFN3Q9BTN0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.35■□□□□ 0.85
LRFN3Q9BTN0 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.35■□□□□ 0.85
LRFN3Q9BTN0 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.35■□□□□ 0.85
LRFN3Q9BTN0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRFN3Q9BTN0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.35■□□□□ 0.85
LRFN3Q9BTN0 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
LRFN3Q9BTN0 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.35■□□□□ 0.85
LRFN3Q9BTN0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRFN3Q9BTN0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.35■□□□□ 0.85
LRFN3Q9BTN0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LRFN3Q9BTN0 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRFN3Q9BTN0 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRFN3Q9BTN0 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.34■□□□□ 0.85
LRFN3Q9BTN0 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms