Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SPENQ96T58 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SPENQ96T58 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SPENQ96T58 RBM17P1-201ENST00000453646 1190 ntBASIC18.37■□□□□ 0.53
SPENQ96T58 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.37■□□□□ 0.53
SPENQ96T58 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.37■□□□□ 0.53
SPENQ96T58 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SPENQ96T58 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SPENQ96T58 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.37■□□□□ 0.53
SPENQ96T58 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.37■□□□□ 0.53
SPENQ96T58 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SPENQ96T58 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.37■□□□□ 0.53
SPENQ96T58 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.37■□□□□ 0.53
SPENQ96T58 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SPENQ96T58 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SPENQ96T58 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
SPENQ96T58 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SPENQ96T58 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SPENQ96T58 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.37■□□□□ 0.53
SPENQ96T58 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.37■□□□□ 0.53
SPENQ96T58 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.37■□□□□ 0.53
SPENQ96T58 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SPENQ96T58 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SPENQ96T58 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.36■□□□□ 0.53
SPENQ96T58 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
SPENQ96T58 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SPENQ96T58 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
SPENQ96T58 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SPENQ96T58 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SPENQ96T58 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SPENQ96T58 AC233723.2-201ENST00000623798 2106 ntBASIC18.36■□□□□ 0.53
SPENQ96T58 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SPENQ96T58 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SPENQ96T58 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.36■□□□□ 0.53
SPENQ96T58 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.36■□□□□ 0.53
SPENQ96T58 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.36■□□□□ 0.53
SPENQ96T58 AL121894.2-201ENST00000602977 491 ntBASIC18.36■□□□□ 0.53
SPENQ96T58 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.36■□□□□ 0.53
SPENQ96T58 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SPENQ96T58 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SPENQ96T58 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPENQ96T58 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPENQ96T58 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SPENQ96T58 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPENQ96T58 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPENQ96T58 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPENQ96T58 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SPENQ96T58 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.35■□□□□ 0.53
SPENQ96T58 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SPENQ96T58 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.35■□□□□ 0.53
SPENQ96T58 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPENQ96T58 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.35■□□□□ 0.53
SPENQ96T58 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SPENQ96T58 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.35■□□□□ 0.53
SPENQ96T58 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SPENQ96T58 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.35■□□□□ 0.53
SPENQ96T58 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPENQ96T58 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPENQ96T58 AL390955.1-201ENST00000428694 934 ntBASIC18.35■□□□□ 0.53
SPENQ96T58 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
SPENQ96T58 AL121603.2-201ENST00000557373 2117 ntBASIC18.35■□□□□ 0.53
SPENQ96T58 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SPENQ96T58 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPENQ96T58 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SPENQ96T58 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.34■□□□□ 0.53
SPENQ96T58 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SPENQ96T58 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SPENQ96T58 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPENQ96T58 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.34■□□□□ 0.53
SPENQ96T58 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SPENQ96T58 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SPENQ96T58 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPENQ96T58 MMP23A-201ENST00000234610 1017 ntBASIC18.34■□□□□ 0.53
SPENQ96T58 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.34■□□□□ 0.53
SPENQ96T58 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.34■□□□□ 0.53
SPENQ96T58 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.34■□□□□ 0.53
SPENQ96T58 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.34■□□□□ 0.53
SPENQ96T58 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.34■□□□□ 0.53
SPENQ96T58 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.34■□□□□ 0.53
SPENQ96T58 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPENQ96T58 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPENQ96T58 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPENQ96T58 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPENQ96T58 UNC93B2-201ENST00000285383 730 ntBASIC18.34■□□□□ 0.53
SPENQ96T58 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPENQ96T58 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.34■□□□□ 0.53
SPENQ96T58 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
SPENQ96T58 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.34■□□□□ 0.53
SPENQ96T58 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SPENQ96T58 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
SPENQ96T58 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SPENQ96T58 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
SPENQ96T58 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.33■□□□□ 0.53
SPENQ96T58 GUSBP5-202ENST00000510805 1989 ntBASIC18.33■□□□□ 0.53
SPENQ96T58 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.53
SPENQ96T58 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SPENQ96T58 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.33■□□□□ 0.53
SPENQ96T58 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.33■□□□□ 0.52
SPENQ96T58 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.33■□□□□ 0.52
SPENQ96T58 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms