Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB3IPQ96QF0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.71■□□□□ 0.75
RAB3IPQ96QF0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.71■□□□□ 0.75
RAB3IPQ96QF0 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB3IPQ96QF0 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB3IPQ96QF0 AC079598.2-202ENST00000546624 1451 ntBASIC19.71■□□□□ 0.75
RAB3IPQ96QF0 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB3IPQ96QF0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAB3IPQ96QF0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB3IPQ96QF0 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB3IPQ96QF0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAB3IPQ96QF0 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.7■□□□□ 0.74
RAB3IPQ96QF0 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAB3IPQ96QF0 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.7■□□□□ 0.74
RAB3IPQ96QF0 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.7■□□□□ 0.74
RAB3IPQ96QF0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAB3IPQ96QF0 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB3IPQ96QF0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.7■□□□□ 0.74
RAB3IPQ96QF0 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
RAB3IPQ96QF0 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAB3IPQ96QF0 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB3IPQ96QF0 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB3IPQ96QF0 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB3IPQ96QF0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAB3IPQ96QF0 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB3IPQ96QF0 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RAB3IPQ96QF0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.69■□□□□ 0.74
RAB3IPQ96QF0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB3IPQ96QF0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAB3IPQ96QF0 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAB3IPQ96QF0 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB3IPQ96QF0 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.69■□□□□ 0.74
RAB3IPQ96QF0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.69■□□□□ 0.74
RAB3IPQ96QF0 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAB3IPQ96QF0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
RAB3IPQ96QF0 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAB3IPQ96QF0 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.69■□□□□ 0.74
RAB3IPQ96QF0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.69■□□□□ 0.74
RAB3IPQ96QF0 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB3IPQ96QF0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAB3IPQ96QF0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAB3IPQ96QF0 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB3IPQ96QF0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB3IPQ96QF0 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB3IPQ96QF0 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB3IPQ96QF0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB3IPQ96QF0 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB3IPQ96QF0 AL049812.1-201ENST00000432563 2267 ntBASIC19.68■□□□□ 0.74
RAB3IPQ96QF0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB3IPQ96QF0 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RAB3IPQ96QF0 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
RAB3IPQ96QF0 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RAB3IPQ96QF0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB3IPQ96QF0 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RAB3IPQ96QF0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.68■□□□□ 0.74
RAB3IPQ96QF0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.68■□□□□ 0.74
RAB3IPQ96QF0 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB3IPQ96QF0 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB3IPQ96QF0 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB3IPQ96QF0 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB3IPQ96QF0 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
RAB3IPQ96QF0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RAB3IPQ96QF0 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.67■□□□□ 0.74
RAB3IPQ96QF0 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.67■□□□□ 0.74
RAB3IPQ96QF0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB3IPQ96QF0 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB3IPQ96QF0 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB3IPQ96QF0 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB3IPQ96QF0 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB3IPQ96QF0 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB3IPQ96QF0 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
RAB3IPQ96QF0 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.67■□□□□ 0.74
RAB3IPQ96QF0 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RAB3IPQ96QF0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB3IPQ96QF0 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB3IPQ96QF0 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.67■□□□□ 0.74
RAB3IPQ96QF0 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RAB3IPQ96QF0 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RAB3IPQ96QF0 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
RAB3IPQ96QF0 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.67■□□□□ 0.74
RAB3IPQ96QF0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.67■□□□□ 0.74
RAB3IPQ96QF0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RAB3IPQ96QF0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3IPQ96QF0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.66■□□□□ 0.74
RAB3IPQ96QF0 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RAB3IPQ96QF0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3IPQ96QF0 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RAB3IPQ96QF0 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.66■□□□□ 0.74
RAB3IPQ96QF0 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3IPQ96QF0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3IPQ96QF0 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RAB3IPQ96QF0 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3IPQ96QF0 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3IPQ96QF0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3IPQ96QF0 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3IPQ96QF0 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RAB3IPQ96QF0 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RAB3IPQ96QF0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3IPQ96QF0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3IPQ96QF0 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms