Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
NECTIN4Q96NY8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.04■□□□□ 0.96
NECTIN4Q96NY8 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
NECTIN4Q96NY8 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NECTIN4Q96NY8 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
NECTIN4Q96NY8 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NECTIN4Q96NY8 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
NECTIN4Q96NY8 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NECTIN4Q96NY8 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NECTIN4Q96NY8 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.03■□□□□ 0.96
NECTIN4Q96NY8 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.03■□□□□ 0.96
NECTIN4Q96NY8 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.03■□□□□ 0.96
NECTIN4Q96NY8 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.03■□□□□ 0.96
NECTIN4Q96NY8 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.03■□□□□ 0.96
NECTIN4Q96NY8 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.03■□□□□ 0.96
NECTIN4Q96NY8 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.03■□□□□ 0.96
NECTIN4Q96NY8 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NECTIN4Q96NY8 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NECTIN4Q96NY8 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NECTIN4Q96NY8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NECTIN4Q96NY8 KRT8P9-201ENST00000558927 1449 ntBASIC21.03■□□□□ 0.96
NECTIN4Q96NY8 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NECTIN4Q96NY8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NECTIN4Q96NY8 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NECTIN4Q96NY8 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NECTIN4Q96NY8 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
NECTIN4Q96NY8 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NECTIN4Q96NY8 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NECTIN4Q96NY8 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NECTIN4Q96NY8 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NECTIN4Q96NY8 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.02■□□□□ 0.96
NECTIN4Q96NY8 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NECTIN4Q96NY8 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
NECTIN4Q96NY8 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.02■□□□□ 0.96
NECTIN4Q96NY8 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.02■□□□□ 0.96
NECTIN4Q96NY8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.02■□□□□ 0.96
NECTIN4Q96NY8 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.02■□□□□ 0.96
NECTIN4Q96NY8 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NECTIN4Q96NY8 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NECTIN4Q96NY8 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NECTIN4Q96NY8 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NECTIN4Q96NY8 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NECTIN4Q96NY8 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
NECTIN4Q96NY8 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
NECTIN4Q96NY8 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.01■□□□□ 0.95
NECTIN4Q96NY8 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.01■□□□□ 0.95
NECTIN4Q96NY8 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.01■□□□□ 0.95
NECTIN4Q96NY8 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.01■□□□□ 0.95
NECTIN4Q96NY8 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.01■□□□□ 0.95
NECTIN4Q96NY8 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.01■□□□□ 0.95
NECTIN4Q96NY8 FITM1-202ENST00000559294 800 ntBASIC21.01■□□□□ 0.95
NECTIN4Q96NY8 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.01■□□□□ 0.95
NECTIN4Q96NY8 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.01■□□□□ 0.95
NECTIN4Q96NY8 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NECTIN4Q96NY8 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NECTIN4Q96NY8 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21■□□□□ 0.95
NECTIN4Q96NY8 AC012676.1-201ENST00000574705 1949 ntBASIC21■□□□□ 0.95
NECTIN4Q96NY8 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NECTIN4Q96NY8 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21■□□□□ 0.95
NECTIN4Q96NY8 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21■□□□□ 0.95
NECTIN4Q96NY8 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NECTIN4Q96NY8 TERF1P1-201ENST00000311003 1181 ntBASIC21■□□□□ 0.95
NECTIN4Q96NY8 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NECTIN4Q96NY8 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NECTIN4Q96NY8 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NECTIN4Q96NY8 KRT18P57-201ENST00000443599 1254 ntBASIC21■□□□□ 0.95
NECTIN4Q96NY8 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21■□□□□ 0.95
NECTIN4Q96NY8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NECTIN4Q96NY8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21■□□□□ 0.95
NECTIN4Q96NY8 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21■□□□□ 0.95
NECTIN4Q96NY8 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.99■□□□□ 0.95
NECTIN4Q96NY8 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NECTIN4Q96NY8 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NECTIN4Q96NY8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.99■□□□□ 0.95
NECTIN4Q96NY8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
NECTIN4Q96NY8 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.99■□□□□ 0.95
NECTIN4Q96NY8 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
NECTIN4Q96NY8 KSR1P1-201ENST00000446298 240 ntBASIC20.99■□□□□ 0.95
NECTIN4Q96NY8 AC116562.2-201ENST00000507042 360 ntBASIC20.99■□□□□ 0.95
NECTIN4Q96NY8 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NECTIN4Q96NY8 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NECTIN4Q96NY8 AC124283.5-201ENST00000624661 1809 ntBASIC20.99■□□□□ 0.95
NECTIN4Q96NY8 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.99■□□□□ 0.95
NECTIN4Q96NY8 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
NECTIN4Q96NY8 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NECTIN4Q96NY8 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NECTIN4Q96NY8 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
NECTIN4Q96NY8 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NECTIN4Q96NY8 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.98■□□□□ 0.95
NECTIN4Q96NY8 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NECTIN4Q96NY8 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NECTIN4Q96NY8 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NECTIN4Q96NY8 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NECTIN4Q96NY8 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
NECTIN4Q96NY8 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
NECTIN4Q96NY8 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NECTIN4Q96NY8 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
NECTIN4Q96NY8 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NECTIN4Q96NY8 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NECTIN4Q96NY8 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms