Protein–RNA interactions for Protein: Q92772

CDKL2, Cyclin-dependent kinase-like 2, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL2Q92772 AC003957.1-201ENST00000625108 2673 ntBASIC20.37■□□□□ 0.85
CDKL2Q92772 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL2Q92772 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL2Q92772 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL2Q92772 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.36■□□□□ 0.85
CDKL2Q92772 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL2Q92772 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CDKL2Q92772 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.36■□□□□ 0.85
CDKL2Q92772 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.36■□□□□ 0.85
CDKL2Q92772 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL2Q92772 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.36■□□□□ 0.85
CDKL2Q92772 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.36■□□□□ 0.85
CDKL2Q92772 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL2Q92772 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL2Q92772 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.36■□□□□ 0.85
CDKL2Q92772 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL2Q92772 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.36■□□□□ 0.85
CDKL2Q92772 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.36■□□□□ 0.85
CDKL2Q92772 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CDKL2Q92772 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL2Q92772 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL2Q92772 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL2Q92772 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
CDKL2Q92772 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDKL2Q92772 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDKL2Q92772 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDKL2Q92772 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDKL2Q92772 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDKL2Q92772 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDKL2Q92772 MIR638-201ENST00000385237 100 ntBASIC20.35■□□□□ 0.85
CDKL2Q92772 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDKL2Q92772 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.35■□□□□ 0.85
CDKL2Q92772 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.35■□□□□ 0.85
CDKL2Q92772 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.35■□□□□ 0.85
CDKL2Q92772 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.35■□□□□ 0.85
CDKL2Q92772 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDKL2Q92772 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
CDKL2Q92772 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.35■□□□□ 0.85
CDKL2Q92772 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.35■□□□□ 0.85
CDKL2Q92772 DPP3P2-201ENST00000416030 1696 ntBASIC20.35■□□□□ 0.85
CDKL2Q92772 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDKL2Q92772 AC004854.2-201ENST00000608450 1441 ntBASIC20.35■□□□□ 0.85
CDKL2Q92772 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDKL2Q92772 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDKL2Q92772 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDKL2Q92772 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDKL2Q92772 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDKL2Q92772 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDKL2Q92772 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.34■□□□□ 0.85
CDKL2Q92772 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDKL2Q92772 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.34■□□□□ 0.85
CDKL2Q92772 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDKL2Q92772 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDKL2Q92772 KRT19P1-201ENST00000405746 1186 ntBASIC20.34■□□□□ 0.85
CDKL2Q92772 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDKL2Q92772 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDKL2Q92772 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CDKL2Q92772 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.34■□□□□ 0.85
CDKL2Q92772 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDKL2Q92772 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.34■□□□□ 0.85
CDKL2Q92772 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDKL2Q92772 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDKL2Q92772 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.34■□□□□ 0.85
CDKL2Q92772 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDKL2Q92772 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDKL2Q92772 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDKL2Q92772 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDKL2Q92772 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CDKL2Q92772 AC019069.1-201ENST00000610008 1333 ntBASIC20.33■□□□□ 0.85
CDKL2Q92772 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.33■□□□□ 0.85
CDKL2Q92772 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.33■□□□□ 0.85
CDKL2Q92772 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.33■□□□□ 0.85
CDKL2Q92772 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDKL2Q92772 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDKL2Q92772 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.33■□□□□ 0.85
CDKL2Q92772 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.33■□□□□ 0.85
CDKL2Q92772 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDKL2Q92772 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDKL2Q92772 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.33■□□□□ 0.85
CDKL2Q92772 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CDKL2Q92772 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
CDKL2Q92772 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.33■□□□□ 0.85
CDKL2Q92772 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CDKL2Q92772 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.33■□□□□ 0.85
CDKL2Q92772 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.33■□□□□ 0.85
CDKL2Q92772 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDKL2Q92772 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.33■□□□□ 0.84
CDKL2Q92772 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CDKL2Q92772 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDKL2Q92772 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDKL2Q92772 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDKL2Q92772 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.32■□□□□ 0.84
CDKL2Q92772 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDKL2Q92772 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDKL2Q92772 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDKL2Q92772 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDKL2Q92772 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.32■□□□□ 0.84
CDKL2Q92772 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.32■□□□□ 0.84
CDKL2Q92772 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDKL2Q92772 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms