Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 TMEM179-206ENST00000616017 1645 ntBASIC18.46■□□□□ 0.55
CNIH3Q8TBE1 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNIH3Q8TBE1 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNIH3Q8TBE1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CNIH3Q8TBE1 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CNIH3Q8TBE1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNIH3Q8TBE1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.46■□□□□ 0.55
CNIH3Q8TBE1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.46■□□□□ 0.55
CNIH3Q8TBE1 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
CNIH3Q8TBE1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CNIH3Q8TBE1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNIH3Q8TBE1 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CNIH3Q8TBE1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CNIH3Q8TBE1 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNIH3Q8TBE1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.45■□□□□ 0.54
CNIH3Q8TBE1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CNIH3Q8TBE1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNIH3Q8TBE1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.45■□□□□ 0.54
CNIH3Q8TBE1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CNIH3Q8TBE1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.45■□□□□ 0.54
CNIH3Q8TBE1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.45■□□□□ 0.54
CNIH3Q8TBE1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNIH3Q8TBE1 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CNIH3Q8TBE1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.45■□□□□ 0.54
CNIH3Q8TBE1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.45■□□□□ 0.54
CNIH3Q8TBE1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.45■□□□□ 0.54
CNIH3Q8TBE1 AL512631.2-201ENST00000604634 923 ntBASIC18.45■□□□□ 0.54
CNIH3Q8TBE1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.45■□□□□ 0.54
CNIH3Q8TBE1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNIH3Q8TBE1 AC120498.9-201ENST00000339021 3867 ntBASIC18.45■□□□□ 0.54
CNIH3Q8TBE1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNIH3Q8TBE1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNIH3Q8TBE1 TREX1-205ENST00000625293 1783 ntBASIC18.45■□□□□ 0.54
CNIH3Q8TBE1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CNIH3Q8TBE1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNIH3Q8TBE1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CNIH3Q8TBE1 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CNIH3Q8TBE1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.44■□□□□ 0.54
CNIH3Q8TBE1 AC005224.4-201ENST00000583262 1652 ntBASIC18.44■□□□□ 0.54
CNIH3Q8TBE1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNIH3Q8TBE1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CNIH3Q8TBE1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNIH3Q8TBE1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.44■□□□□ 0.54
CNIH3Q8TBE1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNIH3Q8TBE1 GUSBP5-201ENST00000418136 578 ntBASIC18.44■□□□□ 0.54
CNIH3Q8TBE1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.44■□□□□ 0.54
CNIH3Q8TBE1 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.44■□□□□ 0.54
CNIH3Q8TBE1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CNIH3Q8TBE1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNIH3Q8TBE1 AC011298.3-201ENST00000615796 283 ntBASIC18.44■□□□□ 0.54
CNIH3Q8TBE1 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CNIH3Q8TBE1 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.44■□□□□ 0.54
CNIH3Q8TBE1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.44■□□□□ 0.54
CNIH3Q8TBE1 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CNIH3Q8TBE1 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CNIH3Q8TBE1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
CNIH3Q8TBE1 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CNIH3Q8TBE1 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNIH3Q8TBE1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.44■□□□□ 0.54
CNIH3Q8TBE1 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNIH3Q8TBE1 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNIH3Q8TBE1 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CNIH3Q8TBE1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNIH3Q8TBE1 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.43■□□□□ 0.54
CNIH3Q8TBE1 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNIH3Q8TBE1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNIH3Q8TBE1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.43■□□□□ 0.54
CNIH3Q8TBE1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.43■□□□□ 0.54
CNIH3Q8TBE1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNIH3Q8TBE1 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CNIH3Q8TBE1 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.43■□□□□ 0.54
CNIH3Q8TBE1 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CNIH3Q8TBE1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.43■□□□□ 0.54
CNIH3Q8TBE1 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNIH3Q8TBE1 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNIH3Q8TBE1 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNIH3Q8TBE1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CNIH3Q8TBE1 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNIH3Q8TBE1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNIH3Q8TBE1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNIH3Q8TBE1 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNIH3Q8TBE1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNIH3Q8TBE1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNIH3Q8TBE1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CNIH3Q8TBE1 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CNIH3Q8TBE1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.42■□□□□ 0.54
CNIH3Q8TBE1 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNIH3Q8TBE1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNIH3Q8TBE1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNIH3Q8TBE1 AC133561.4-201ENST00000566112 224 ntBASIC18.42■□□□□ 0.54
CNIH3Q8TBE1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CNIH3Q8TBE1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNIH3Q8TBE1 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.42■□□□□ 0.54
CNIH3Q8TBE1 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNIH3Q8TBE1 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNIH3Q8TBE1 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNIH3Q8TBE1 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNIH3Q8TBE1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNIH3Q8TBE1 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
CNIH3Q8TBE1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms