Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SMARCC2Q8TAQ2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC23.71■■□□□ 1.39
SMARCC2Q8TAQ2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SMARCC2Q8TAQ2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC23.7■■□□□ 1.39
SMARCC2Q8TAQ2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.39
SMARCC2Q8TAQ2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
SMARCC2Q8TAQ2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
SMARCC2Q8TAQ2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.39
SMARCC2Q8TAQ2 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
SMARCC2Q8TAQ2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC23.7■■□□□ 1.38
SMARCC2Q8TAQ2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SMARCC2Q8TAQ2 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SMARCC2Q8TAQ2 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC23.7■■□□□ 1.38
SMARCC2Q8TAQ2 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC23.7■■□□□ 1.38
SMARCC2Q8TAQ2 AC142086.2-201ENST00000569753 217 ntBASIC23.7■■□□□ 1.38
SMARCC2Q8TAQ2 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC23.7■■□□□ 1.38
SMARCC2Q8TAQ2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SMARCC2Q8TAQ2 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SMARCC2Q8TAQ2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC23.7■■□□□ 1.38
SMARCC2Q8TAQ2 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
SMARCC2Q8TAQ2 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SMARCC2Q8TAQ2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SMARCC2Q8TAQ2 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SMARCC2Q8TAQ2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
SMARCC2Q8TAQ2 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC23.69■■□□□ 1.38
SMARCC2Q8TAQ2 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC23.69■■□□□ 1.38
SMARCC2Q8TAQ2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.69■■□□□ 1.38
SMARCC2Q8TAQ2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC23.69■■□□□ 1.38
SMARCC2Q8TAQ2 MARS-234ENST00000630571 216 ntTSL 5 BASIC23.69■■□□□ 1.38
SMARCC2Q8TAQ2 MARS-235ENST00000630803 183 ntTSL 3 BASIC23.69■■□□□ 1.38
SMARCC2Q8TAQ2 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC23.69■■□□□ 1.38
SMARCC2Q8TAQ2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SMARCC2Q8TAQ2 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SMARCC2Q8TAQ2 AC112907.3-201ENST00000577781 2400 ntBASIC23.69■■□□□ 1.38
SMARCC2Q8TAQ2 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SMARCC2Q8TAQ2 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SMARCC2Q8TAQ2 AC010980.2-201ENST00000587099 1412 ntBASIC23.68■■□□□ 1.38
SMARCC2Q8TAQ2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
SMARCC2Q8TAQ2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SMARCC2Q8TAQ2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC23.68■■□□□ 1.38
SMARCC2Q8TAQ2 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC23.68■■□□□ 1.38
SMARCC2Q8TAQ2 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC23.68■■□□□ 1.38
SMARCC2Q8TAQ2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SMARCC2Q8TAQ2 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC23.68■■□□□ 1.38
SMARCC2Q8TAQ2 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC23.68■■□□□ 1.38
SMARCC2Q8TAQ2 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SMARCC2Q8TAQ2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SMARCC2Q8TAQ2 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
SMARCC2Q8TAQ2 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SMARCC2Q8TAQ2 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SMARCC2Q8TAQ2 ME2-218ENST00000640965 2476 ntTSL 5 BASIC23.68■■□□□ 1.38
SMARCC2Q8TAQ2 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC23.68■■□□□ 1.38
SMARCC2Q8TAQ2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
SMARCC2Q8TAQ2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC23.67■■□□□ 1.38
SMARCC2Q8TAQ2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SMARCC2Q8TAQ2 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMARCC2Q8TAQ2 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
SMARCC2Q8TAQ2 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMARCC2Q8TAQ2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SMARCC2Q8TAQ2 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMARCC2Q8TAQ2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMARCC2Q8TAQ2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SMARCC2Q8TAQ2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC23.67■■□□□ 1.38
SMARCC2Q8TAQ2 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SMARCC2Q8TAQ2 MIPEPP3-201ENST00000412105 444 ntBASIC23.67■■□□□ 1.38
SMARCC2Q8TAQ2 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC23.67■■□□□ 1.38
SMARCC2Q8TAQ2 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SMARCC2Q8TAQ2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SMARCC2Q8TAQ2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMARCC2Q8TAQ2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
SMARCC2Q8TAQ2 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMARCC2Q8TAQ2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC23.67■■□□□ 1.38
SMARCC2Q8TAQ2 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC23.67■■□□□ 1.38
SMARCC2Q8TAQ2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC23.67■■□□□ 1.38
SMARCC2Q8TAQ2 PKD1P6-201ENST00000343738 4769 ntBASIC23.67■■□□□ 1.38
SMARCC2Q8TAQ2 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC23.67■■□□□ 1.38
SMARCC2Q8TAQ2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC23.67■■□□□ 1.38
SMARCC2Q8TAQ2 SMG8-203ENST00000578922 2178 ntBASIC23.67■■□□□ 1.38
SMARCC2Q8TAQ2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMARCC2Q8TAQ2 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SMARCC2Q8TAQ2 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMARCC2Q8TAQ2 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.66■■□□□ 1.38
SMARCC2Q8TAQ2 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC23.66■■□□□ 1.38
SMARCC2Q8TAQ2 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC23.66■■□□□ 1.38
SMARCC2Q8TAQ2 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC23.66■■□□□ 1.38
SMARCC2Q8TAQ2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMARCC2Q8TAQ2 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
SMARCC2Q8TAQ2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMARCC2Q8TAQ2 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMARCC2Q8TAQ2 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SMARCC2Q8TAQ2 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC23.65■■□□□ 1.38
SMARCC2Q8TAQ2 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SMARCC2Q8TAQ2 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
SMARCC2Q8TAQ2 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SMARCC2Q8TAQ2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SMARCC2Q8TAQ2 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SMARCC2Q8TAQ2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC23.65■■□□□ 1.38
SMARCC2Q8TAQ2 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.65■■□□□ 1.38
SMARCC2Q8TAQ2 BX276092.2-201ENST00000417668 665 ntBASIC23.65■■□□□ 1.38
SMARCC2Q8TAQ2 APTR-205ENST00000447009 902 ntTSL 2 BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms