Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDND2Q8NHS1 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
CLDND2Q8NHS1 LINC01006-201ENST00000333319 2292 ntBASIC17.16■□□□□ 0.34
CLDND2Q8NHS1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDND2Q8NHS1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.15■□□□□ 0.34
CLDND2Q8NHS1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDND2Q8NHS1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDND2Q8NHS1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDND2Q8NHS1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDND2Q8NHS1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDND2Q8NHS1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CLDND2Q8NHS1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDND2Q8NHS1 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLDND2Q8NHS1 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDND2Q8NHS1 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.15■□□□□ 0.34
CLDND2Q8NHS1 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLDND2Q8NHS1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDND2Q8NHS1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDND2Q8NHS1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDND2Q8NHS1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.15■□□□□ 0.34
CLDND2Q8NHS1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDND2Q8NHS1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLDND2Q8NHS1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDND2Q8NHS1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDND2Q8NHS1 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.15■□□□□ 0.34
CLDND2Q8NHS1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDND2Q8NHS1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDND2Q8NHS1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDND2Q8NHS1 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.14■□□□□ 0.33
CLDND2Q8NHS1 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDND2Q8NHS1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CLDND2Q8NHS1 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.14■□□□□ 0.33
CLDND2Q8NHS1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDND2Q8NHS1 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDND2Q8NHS1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDND2Q8NHS1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDND2Q8NHS1 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CLDND2Q8NHS1 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDND2Q8NHS1 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDND2Q8NHS1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CLDND2Q8NHS1 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.14■□□□□ 0.33
CLDND2Q8NHS1 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CLDND2Q8NHS1 AC026366.1-201ENST00000488803 879 ntBASIC17.14■□□□□ 0.33
CLDND2Q8NHS1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CLDND2Q8NHS1 AP003097.1-201ENST00000530657 1135 ntBASIC17.14■□□□□ 0.33
CLDND2Q8NHS1 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLDND2Q8NHS1 AC060766.5-201ENST00000590539 871 ntBASIC17.14■□□□□ 0.33
CLDND2Q8NHS1 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.14■□□□□ 0.33
CLDND2Q8NHS1 HLA-B-256ENST00000639848 1089 ntBASIC17.14■□□□□ 0.33
CLDND2Q8NHS1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLDND2Q8NHS1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDND2Q8NHS1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.14■□□□□ 0.33
CLDND2Q8NHS1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLDND2Q8NHS1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLDND2Q8NHS1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDND2Q8NHS1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.13■□□□□ 0.33
CLDND2Q8NHS1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDND2Q8NHS1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDND2Q8NHS1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.13■□□□□ 0.33
CLDND2Q8NHS1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDND2Q8NHS1 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CLDND2Q8NHS1 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDND2Q8NHS1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDND2Q8NHS1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.13■□□□□ 0.33
CLDND2Q8NHS1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDND2Q8NHS1 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDND2Q8NHS1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDND2Q8NHS1 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.13■□□□□ 0.33
CLDND2Q8NHS1 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.13■□□□□ 0.33
CLDND2Q8NHS1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.13■□□□□ 0.33
CLDND2Q8NHS1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDND2Q8NHS1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDND2Q8NHS1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDND2Q8NHS1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDND2Q8NHS1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.13■□□□□ 0.33
CLDND2Q8NHS1 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDND2Q8NHS1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDND2Q8NHS1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CLDND2Q8NHS1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDND2Q8NHS1 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDND2Q8NHS1 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDND2Q8NHS1 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDND2Q8NHS1 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CLDND2Q8NHS1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDND2Q8NHS1 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CLDND2Q8NHS1 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDND2Q8NHS1 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDND2Q8NHS1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CLDND2Q8NHS1 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDND2Q8NHS1 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.12■□□□□ 0.33
CLDND2Q8NHS1 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.12■□□□□ 0.33
CLDND2Q8NHS1 AC128676.1-201ENST00000454392 318 ntBASIC17.12■□□□□ 0.33
CLDND2Q8NHS1 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDND2Q8NHS1 AC098590.1-201ENST00000468126 897 ntBASIC17.12■□□□□ 0.33
CLDND2Q8NHS1 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.12■□□□□ 0.33
CLDND2Q8NHS1 AC093827.2-201ENST00000512654 315 ntBASIC17.12■□□□□ 0.33
CLDND2Q8NHS1 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.12■□□□□ 0.33
CLDND2Q8NHS1 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDND2Q8NHS1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDND2Q8NHS1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms