Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRFBP1Q8NEF9 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRFBP1Q8NEF9 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRFBP1Q8NEF9 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.27■□□□□ 0.68
SRFBP1Q8NEF9 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SRFBP1Q8NEF9 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SRFBP1Q8NEF9 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRFBP1Q8NEF9 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SRFBP1Q8NEF9 AL355472.2-201ENST00000422958 438 ntBASIC19.27■□□□□ 0.68
SRFBP1Q8NEF9 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.27■□□□□ 0.68
SRFBP1Q8NEF9 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.27■□□□□ 0.68
SRFBP1Q8NEF9 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SRFBP1Q8NEF9 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.27■□□□□ 0.68
SRFBP1Q8NEF9 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRFBP1Q8NEF9 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRFBP1Q8NEF9 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.27■□□□□ 0.68
SRFBP1Q8NEF9 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
SRFBP1Q8NEF9 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SRFBP1Q8NEF9 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.27■□□□□ 0.67
SRFBP1Q8NEF9 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SRFBP1Q8NEF9 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SRFBP1Q8NEF9 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.26■□□□□ 0.67
SRFBP1Q8NEF9 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
SRFBP1Q8NEF9 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRFBP1Q8NEF9 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRFBP1Q8NEF9 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SRFBP1Q8NEF9 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SRFBP1Q8NEF9 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRFBP1Q8NEF9 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRFBP1Q8NEF9 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRFBP1Q8NEF9 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRFBP1Q8NEF9 SLC29A4P1-201ENST00000398760 971 ntBASIC19.26■□□□□ 0.67
SRFBP1Q8NEF9 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.26■□□□□ 0.67
SRFBP1Q8NEF9 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.26■□□□□ 0.67
SRFBP1Q8NEF9 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.26■□□□□ 0.67
SRFBP1Q8NEF9 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRFBP1Q8NEF9 LINC01006-201ENST00000333319 2292 ntBASIC19.26■□□□□ 0.67
SRFBP1Q8NEF9 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.26■□□□□ 0.67
SRFBP1Q8NEF9 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRFBP1Q8NEF9 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.25■□□□□ 0.67
SRFBP1Q8NEF9 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SRFBP1Q8NEF9 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRFBP1Q8NEF9 RNF165-205ENST00000588679 2904 ntBASIC19.25■□□□□ 0.67
SRFBP1Q8NEF9 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRFBP1Q8NEF9 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
SRFBP1Q8NEF9 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRFBP1Q8NEF9 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SRFBP1Q8NEF9 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.25■□□□□ 0.67
SRFBP1Q8NEF9 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
SRFBP1Q8NEF9 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
SRFBP1Q8NEF9 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRFBP1Q8NEF9 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SRFBP1Q8NEF9 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.25■□□□□ 0.67
SRFBP1Q8NEF9 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRFBP1Q8NEF9 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SRFBP1Q8NEF9 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SRFBP1Q8NEF9 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.25■□□□□ 0.67
SRFBP1Q8NEF9 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRFBP1Q8NEF9 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRFBP1Q8NEF9 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.24■□□□□ 0.67
SRFBP1Q8NEF9 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRFBP1Q8NEF9 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRFBP1Q8NEF9 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRFBP1Q8NEF9 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRFBP1Q8NEF9 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.24■□□□□ 0.67
SRFBP1Q8NEF9 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
SRFBP1Q8NEF9 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.24■□□□□ 0.67
SRFBP1Q8NEF9 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.24■□□□□ 0.67
SRFBP1Q8NEF9 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.24■□□□□ 0.67
SRFBP1Q8NEF9 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.24■□□□□ 0.67
SRFBP1Q8NEF9 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.24■□□□□ 0.67
SRFBP1Q8NEF9 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.24■□□□□ 0.67
SRFBP1Q8NEF9 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.24■□□□□ 0.67
SRFBP1Q8NEF9 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.24■□□□□ 0.67
SRFBP1Q8NEF9 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.24■□□□□ 0.67
SRFBP1Q8NEF9 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRFBP1Q8NEF9 AL157384.1-201ENST00000445995 2473 ntBASIC19.24■□□□□ 0.67
SRFBP1Q8NEF9 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRFBP1Q8NEF9 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.23■□□□□ 0.67
SRFBP1Q8NEF9 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.23■□□□□ 0.67
SRFBP1Q8NEF9 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SRFBP1Q8NEF9 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SRFBP1Q8NEF9 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SRFBP1Q8NEF9 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SRFBP1Q8NEF9 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SRFBP1Q8NEF9 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
SRFBP1Q8NEF9 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.23■□□□□ 0.67
SRFBP1Q8NEF9 BX276092.2-201ENST00000417668 665 ntBASIC19.23■□□□□ 0.67
SRFBP1Q8NEF9 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.23■□□□□ 0.67
SRFBP1Q8NEF9 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SRFBP1Q8NEF9 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.23■□□□□ 0.67
SRFBP1Q8NEF9 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.23■□□□□ 0.67
SRFBP1Q8NEF9 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.23■□□□□ 0.67
SRFBP1Q8NEF9 KRT17P1-201ENST00000399211 1546 ntBASIC19.23■□□□□ 0.67
SRFBP1Q8NEF9 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SRFBP1Q8NEF9 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SRFBP1Q8NEF9 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.23■□□□□ 0.67
SRFBP1Q8NEF9 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
SRFBP1Q8NEF9 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SRFBP1Q8NEF9 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms