Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC22.89■■□□□ 1.25
RETREG2Q8NC44 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
RETREG2Q8NC44 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC22.88■■□□□ 1.25
RETREG2Q8NC44 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RETREG2Q8NC44 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RETREG2Q8NC44 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
RETREG2Q8NC44 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
RETREG2Q8NC44 MFF-205ENST00000354503 1085 ntTSL 2 BASIC22.88■■□□□ 1.25
RETREG2Q8NC44 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RETREG2Q8NC44 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC22.88■■□□□ 1.25
RETREG2Q8NC44 HES2-205ENST00000487437 968 ntTSL 3 BASIC22.88■■□□□ 1.25
RETREG2Q8NC44 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RETREG2Q8NC44 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
RETREG2Q8NC44 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RETREG2Q8NC44 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RETREG2Q8NC44 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
RETREG2Q8NC44 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RETREG2Q8NC44 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
RETREG2Q8NC44 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RETREG2Q8NC44 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC22.87■■□□□ 1.25
RETREG2Q8NC44 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC22.87■■□□□ 1.25
RETREG2Q8NC44 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC22.87■■□□□ 1.25
RETREG2Q8NC44 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RETREG2Q8NC44 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
RETREG2Q8NC44 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC22.87■■□□□ 1.25
RETREG2Q8NC44 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RETREG2Q8NC44 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
RETREG2Q8NC44 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC22.87■■□□□ 1.25
RETREG2Q8NC44 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RETREG2Q8NC44 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC22.86■■□□□ 1.25
RETREG2Q8NC44 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
RETREG2Q8NC44 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.86■■□□□ 1.25
RETREG2Q8NC44 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RETREG2Q8NC44 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
RETREG2Q8NC44 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RETREG2Q8NC44 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RETREG2Q8NC44 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC22.86■■□□□ 1.25
RETREG2Q8NC44 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC22.86■■□□□ 1.25
RETREG2Q8NC44 RN7SL471P-201ENST00000580476 299 ntBASIC22.86■■□□□ 1.25
RETREG2Q8NC44 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC22.86■■□□□ 1.25
RETREG2Q8NC44 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RETREG2Q8NC44 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RETREG2Q8NC44 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22.86■■□□□ 1.25
RETREG2Q8NC44 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RETREG2Q8NC44 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.86■■□□□ 1.25
RETREG2Q8NC44 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
RETREG2Q8NC44 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC22.86■■□□□ 1.25
RETREG2Q8NC44 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RETREG2Q8NC44 NXN-202ENST00000537628 1340 ntTSL 3 BASIC22.85■■□□□ 1.25
RETREG2Q8NC44 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC22.85■■□□□ 1.25
RETREG2Q8NC44 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
RETREG2Q8NC44 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RETREG2Q8NC44 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC22.85■■□□□ 1.25
RETREG2Q8NC44 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RETREG2Q8NC44 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RETREG2Q8NC44 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
RETREG2Q8NC44 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC22.85■■□□□ 1.25
RETREG2Q8NC44 OR2A1-AS1-207ENST00000486094 819 ntBASIC22.85■■□□□ 1.25
RETREG2Q8NC44 REXO2-208ENST00000539754 791 ntTSL 2 BASIC22.85■■□□□ 1.25
RETREG2Q8NC44 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC22.85■■□□□ 1.25
RETREG2Q8NC44 SPIB-206ENST00000596074 847 ntTSL 2 BASIC22.85■■□□□ 1.25
RETREG2Q8NC44 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC22.85■■□□□ 1.25
RETREG2Q8NC44 GCK-205ENST00000437084 1385 ntTSL 5 BASIC22.85■■□□□ 1.25
RETREG2Q8NC44 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RETREG2Q8NC44 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
RETREG2Q8NC44 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RETREG2Q8NC44 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RETREG2Q8NC44 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RETREG2Q8NC44 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC22.84■■□□□ 1.25
RETREG2Q8NC44 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RETREG2Q8NC44 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RETREG2Q8NC44 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RETREG2Q8NC44 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RETREG2Q8NC44 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC22.84■■□□□ 1.25
RETREG2Q8NC44 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
RETREG2Q8NC44 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC22.84■■□□□ 1.25
RETREG2Q8NC44 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RETREG2Q8NC44 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC22.84■■□□□ 1.25
RETREG2Q8NC44 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
RETREG2Q8NC44 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
RETREG2Q8NC44 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.84■■□□□ 1.25
RETREG2Q8NC44 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC22.84■■□□□ 1.25
RETREG2Q8NC44 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
RETREG2Q8NC44 LINC01006-201ENST00000333319 2292 ntBASIC22.83■■□□□ 1.25
RETREG2Q8NC44 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RETREG2Q8NC44 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC22.83■■□□□ 1.25
RETREG2Q8NC44 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
RETREG2Q8NC44 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC22.83■■□□□ 1.25
RETREG2Q8NC44 MIR4497-201ENST00000583208 89 ntBASIC22.83■■□□□ 1.25
RETREG2Q8NC44 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC22.83■■□□□ 1.25
RETREG2Q8NC44 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
RETREG2Q8NC44 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RETREG2Q8NC44 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
RETREG2Q8NC44 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RETREG2Q8NC44 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
RETREG2Q8NC44 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC22.83■■□□□ 1.24
RETREG2Q8NC44 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC22.83■■□□□ 1.24
RETREG2Q8NC44 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
RETREG2Q8NC44 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC22.82■■□□□ 1.24
RETREG2Q8NC44 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms