Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NANOGP1Q8N7R0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
NANOGP1Q8N7R0 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NANOGP1Q8N7R0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
NANOGP1Q8N7R0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.01■□□□□ 0.47
NANOGP1Q8N7R0 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NANOGP1Q8N7R0 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NANOGP1Q8N7R0 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NANOGP1Q8N7R0 AC093503.3-201ENST00000624917 2352 ntBASIC18.01■□□□□ 0.47
NANOGP1Q8N7R0 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NANOGP1Q8N7R0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.01■□□□□ 0.47
NANOGP1Q8N7R0 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
NANOGP1Q8N7R0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
NANOGP1Q8N7R0 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
NANOGP1Q8N7R0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NANOGP1Q8N7R0 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
NANOGP1Q8N7R0 AC116050.2-201ENST00000612102 1779 ntBASIC18■□□□□ 0.47
NANOGP1Q8N7R0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NANOGP1Q8N7R0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18■□□□□ 0.47
NANOGP1Q8N7R0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NANOGP1Q8N7R0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18■□□□□ 0.47
NANOGP1Q8N7R0 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
NANOGP1Q8N7R0 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18■□□□□ 0.47
NANOGP1Q8N7R0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18■□□□□ 0.47
NANOGP1Q8N7R0 GUSBP5-201ENST00000418136 578 ntBASIC18■□□□□ 0.47
NANOGP1Q8N7R0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18■□□□□ 0.47
NANOGP1Q8N7R0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18■□□□□ 0.47
NANOGP1Q8N7R0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18■□□□□ 0.47
NANOGP1Q8N7R0 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18■□□□□ 0.47
NANOGP1Q8N7R0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18■□□□□ 0.47
NANOGP1Q8N7R0 AC008175.2-201ENST00000612840 297 ntBASIC18■□□□□ 0.47
NANOGP1Q8N7R0 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18■□□□□ 0.47
NANOGP1Q8N7R0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NANOGP1Q8N7R0 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
NANOGP1Q8N7R0 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
NANOGP1Q8N7R0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
NANOGP1Q8N7R0 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18■□□□□ 0.47
NANOGP1Q8N7R0 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18■□□□□ 0.47
NANOGP1Q8N7R0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
NANOGP1Q8N7R0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NANOGP1Q8N7R0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
NANOGP1Q8N7R0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18■□□□□ 0.47
NANOGP1Q8N7R0 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.99■□□□□ 0.47
NANOGP1Q8N7R0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.99■□□□□ 0.47
NANOGP1Q8N7R0 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.99■□□□□ 0.47
NANOGP1Q8N7R0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NANOGP1Q8N7R0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.99■□□□□ 0.47
NANOGP1Q8N7R0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.99■□□□□ 0.47
NANOGP1Q8N7R0 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NANOGP1Q8N7R0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NANOGP1Q8N7R0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NANOGP1Q8N7R0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
NANOGP1Q8N7R0 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NANOGP1Q8N7R0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NANOGP1Q8N7R0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NANOGP1Q8N7R0 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NANOGP1Q8N7R0 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NANOGP1Q8N7R0 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
NANOGP1Q8N7R0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
NANOGP1Q8N7R0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NANOGP1Q8N7R0 AC245052.3-201ENST00000450182 901 ntBASIC17.98■□□□□ 0.47
NANOGP1Q8N7R0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.98■□□□□ 0.47
NANOGP1Q8N7R0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NANOGP1Q8N7R0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.98■□□□□ 0.47
NANOGP1Q8N7R0 MIR4767-201ENST00000582827 78 ntBASIC17.98■□□□□ 0.47
NANOGP1Q8N7R0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NANOGP1Q8N7R0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
NANOGP1Q8N7R0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NANOGP1Q8N7R0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NANOGP1Q8N7R0 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NANOGP1Q8N7R0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
NANOGP1Q8N7R0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
NANOGP1Q8N7R0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NANOGP1Q8N7R0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NANOGP1Q8N7R0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NANOGP1Q8N7R0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NANOGP1Q8N7R0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.97■□□□□ 0.47
NANOGP1Q8N7R0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.97■□□□□ 0.47
NANOGP1Q8N7R0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NANOGP1Q8N7R0 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
NANOGP1Q8N7R0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NANOGP1Q8N7R0 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.97■□□□□ 0.47
NANOGP1Q8N7R0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.97■□□□□ 0.47
NANOGP1Q8N7R0 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NANOGP1Q8N7R0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NANOGP1Q8N7R0 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NANOGP1Q8N7R0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NANOGP1Q8N7R0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.97■□□□□ 0.47
NANOGP1Q8N7R0 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
NANOGP1Q8N7R0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
NANOGP1Q8N7R0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
NANOGP1Q8N7R0 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.97■□□□□ 0.47
NANOGP1Q8N7R0 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
NANOGP1Q8N7R0 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NANOGP1Q8N7R0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NANOGP1Q8N7R0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.97■□□□□ 0.47
NANOGP1Q8N7R0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
NANOGP1Q8N7R0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NANOGP1Q8N7R0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NANOGP1Q8N7R0 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms