Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PAF1Q8N7H5 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PAF1Q8N7H5 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PAF1Q8N7H5 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PAF1Q8N7H5 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PAF1Q8N7H5 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PAF1Q8N7H5 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PAF1Q8N7H5 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PAF1Q8N7H5 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PAF1Q8N7H5 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.71■□□□□ 0.91
PAF1Q8N7H5 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.71■□□□□ 0.91
PAF1Q8N7H5 AC010980.2-201ENST00000587099 1412 ntBASIC20.71■□□□□ 0.91
PAF1Q8N7H5 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PAF1Q8N7H5 AL512625.2-201ENST00000417533 625 ntBASIC20.71■□□□□ 0.91
PAF1Q8N7H5 PGM5P4-201ENST00000421970 445 ntBASIC20.71■□□□□ 0.91
PAF1Q8N7H5 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.71■□□□□ 0.91
PAF1Q8N7H5 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.71■□□□□ 0.91
PAF1Q8N7H5 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.71■□□□□ 0.91
PAF1Q8N7H5 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.71■□□□□ 0.91
PAF1Q8N7H5 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.71■□□□□ 0.91
PAF1Q8N7H5 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.71■□□□□ 0.91
PAF1Q8N7H5 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.71■□□□□ 0.91
PAF1Q8N7H5 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PAF1Q8N7H5 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.71■□□□□ 0.91
PAF1Q8N7H5 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PAF1Q8N7H5 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PAF1Q8N7H5 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.71■□□□□ 0.91
PAF1Q8N7H5 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PAF1Q8N7H5 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
PAF1Q8N7H5 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
PAF1Q8N7H5 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PAF1Q8N7H5 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
PAF1Q8N7H5 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PAF1Q8N7H5 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PAF1Q8N7H5 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
PAF1Q8N7H5 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PAF1Q8N7H5 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
PAF1Q8N7H5 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PAF1Q8N7H5 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.7■□□□□ 0.9
PAF1Q8N7H5 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PAF1Q8N7H5 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PAF1Q8N7H5 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
PAF1Q8N7H5 MCRIP2P1-201ENST00000394346 511 ntBASIC20.7■□□□□ 0.9
PAF1Q8N7H5 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PAF1Q8N7H5 AL355472.2-201ENST00000422958 438 ntBASIC20.7■□□□□ 0.9
PAF1Q8N7H5 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
PAF1Q8N7H5 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PAF1Q8N7H5 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PAF1Q8N7H5 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.7■□□□□ 0.9
PAF1Q8N7H5 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PAF1Q8N7H5 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PAF1Q8N7H5 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.7■□□□□ 0.9
PAF1Q8N7H5 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PAF1Q8N7H5 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.7■□□□□ 0.9
PAF1Q8N7H5 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.69■□□□□ 0.9
PAF1Q8N7H5 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.69■□□□□ 0.9
PAF1Q8N7H5 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
PAF1Q8N7H5 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PAF1Q8N7H5 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PAF1Q8N7H5 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PAF1Q8N7H5 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.69■□□□□ 0.9
PAF1Q8N7H5 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PAF1Q8N7H5 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
PAF1Q8N7H5 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PAF1Q8N7H5 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PAF1Q8N7H5 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
PAF1Q8N7H5 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.69■□□□□ 0.9
PAF1Q8N7H5 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PAF1Q8N7H5 HTR7P1-202ENST00000624664 4411 ntBASIC20.69■□□□□ 0.9
PAF1Q8N7H5 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PAF1Q8N7H5 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PAF1Q8N7H5 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.69■□□□□ 0.9
PAF1Q8N7H5 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.69■□□□□ 0.9
PAF1Q8N7H5 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PAF1Q8N7H5 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PAF1Q8N7H5 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PAF1Q8N7H5 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PAF1Q8N7H5 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PAF1Q8N7H5 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PAF1Q8N7H5 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PAF1Q8N7H5 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PAF1Q8N7H5 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PAF1Q8N7H5 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PAF1Q8N7H5 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PAF1Q8N7H5 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.68■□□□□ 0.9
PAF1Q8N7H5 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.68■□□□□ 0.9
PAF1Q8N7H5 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.68■□□□□ 0.9
PAF1Q8N7H5 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
PAF1Q8N7H5 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PAF1Q8N7H5 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PAF1Q8N7H5 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PAF1Q8N7H5 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PAF1Q8N7H5 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PAF1Q8N7H5 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PAF1Q8N7H5 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PAF1Q8N7H5 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
PAF1Q8N7H5 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PAF1Q8N7H5 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PAF1Q8N7H5 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PAF1Q8N7H5 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms