Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LINC00346Q8IVM7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
LINC00346Q8IVM7 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC00346Q8IVM7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LINC00346Q8IVM7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
LINC00346Q8IVM7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.89■□□□□ 0.45
LINC00346Q8IVM7 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.89■□□□□ 0.45
LINC00346Q8IVM7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.89■□□□□ 0.45
LINC00346Q8IVM7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC00346Q8IVM7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC00346Q8IVM7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC00346Q8IVM7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
LINC00346Q8IVM7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC00346Q8IVM7 DPP3P2-201ENST00000416030 1696 ntBASIC17.88■□□□□ 0.45
LINC00346Q8IVM7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC00346Q8IVM7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC00346Q8IVM7 AC016769.1-201ENST00000409132 1010 ntBASIC17.88■□□□□ 0.45
LINC00346Q8IVM7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC00346Q8IVM7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.88■□□□□ 0.45
LINC00346Q8IVM7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC00346Q8IVM7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC00346Q8IVM7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC00346Q8IVM7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC00346Q8IVM7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC00346Q8IVM7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC00346Q8IVM7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LINC00346Q8IVM7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.87■□□□□ 0.45
LINC00346Q8IVM7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.87■□□□□ 0.45
LINC00346Q8IVM7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.87■□□□□ 0.45
LINC00346Q8IVM7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.87■□□□□ 0.45
LINC00346Q8IVM7 AL591742.1-201ENST00000604433 565 ntBASIC17.87■□□□□ 0.45
LINC00346Q8IVM7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LINC00346Q8IVM7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC00346Q8IVM7 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LINC00346Q8IVM7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LINC00346Q8IVM7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.87■□□□□ 0.45
LINC00346Q8IVM7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC00346Q8IVM7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
LINC00346Q8IVM7 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.86■□□□□ 0.45
LINC00346Q8IVM7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC00346Q8IVM7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LINC00346Q8IVM7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC00346Q8IVM7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC00346Q8IVM7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC00346Q8IVM7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC00346Q8IVM7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC00346Q8IVM7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.86■□□□□ 0.45
LINC00346Q8IVM7 KRT18P11-201ENST00000435214 1283 ntBASIC17.86■□□□□ 0.45
LINC00346Q8IVM7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.86■□□□□ 0.45
LINC00346Q8IVM7 MFSD11-216ENST00000590393 1141 ntBASIC17.86■□□□□ 0.45
LINC00346Q8IVM7 AC016405.3-201ENST00000607710 860 ntBASIC17.86■□□□□ 0.45
LINC00346Q8IVM7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC00346Q8IVM7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.86■□□□□ 0.45
LINC00346Q8IVM7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LINC00346Q8IVM7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC00346Q8IVM7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC00346Q8IVM7 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC00346Q8IVM7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC00346Q8IVM7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LINC00346Q8IVM7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.86■□□□□ 0.45
LINC00346Q8IVM7 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.86■□□□□ 0.45
LINC00346Q8IVM7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC00346Q8IVM7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC00346Q8IVM7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
LINC00346Q8IVM7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC00346Q8IVM7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC00346Q8IVM7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.85■□□□□ 0.45
LINC00346Q8IVM7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.85■□□□□ 0.45
LINC00346Q8IVM7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC00346Q8IVM7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
LINC00346Q8IVM7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC00346Q8IVM7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.85■□□□□ 0.45
LINC00346Q8IVM7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
LINC00346Q8IVM7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.85■□□□□ 0.45
LINC00346Q8IVM7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC00346Q8IVM7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LINC00346Q8IVM7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC00346Q8IVM7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LINC00346Q8IVM7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LINC00346Q8IVM7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.85■□□□□ 0.45
LINC00346Q8IVM7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.85■□□□□ 0.45
LINC00346Q8IVM7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.85■□□□□ 0.45
LINC00346Q8IVM7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.85■□□□□ 0.45
LINC00346Q8IVM7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC00346Q8IVM7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.85■□□□□ 0.45
LINC00346Q8IVM7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.85■□□□□ 0.45
LINC00346Q8IVM7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
LINC00346Q8IVM7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.85■□□□□ 0.45
LINC00346Q8IVM7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.85■□□□□ 0.45
LINC00346Q8IVM7 AC013268.1-206ENST00000638368 961 ntBASIC17.85■□□□□ 0.45
LINC00346Q8IVM7 AC112229.1-201ENST00000639295 961 ntBASIC17.85■□□□□ 0.45
LINC00346Q8IVM7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.85■□□□□ 0.45
LINC00346Q8IVM7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
LINC00346Q8IVM7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
LINC00346Q8IVM7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC00346Q8IVM7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LINC00346Q8IVM7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC00346Q8IVM7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC00346Q8IVM7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LINC00346Q8IVM7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms