Protein–RNA interactions for Protein: Q8IUX4

APOBEC3F, DNA dC->dU-editing enzyme APOBEC-3F, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3FQ8IUX4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
APOBEC3FQ8IUX4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
APOBEC3FQ8IUX4 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
APOBEC3FQ8IUX4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
APOBEC3FQ8IUX4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
APOBEC3FQ8IUX4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
APOBEC3FQ8IUX4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
APOBEC3FQ8IUX4 LINC01568-207ENST00000641790 1380 ntBASIC23.93■■□□□ 1.42
APOBEC3FQ8IUX4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
APOBEC3FQ8IUX4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC23.93■■□□□ 1.42
APOBEC3FQ8IUX4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
APOBEC3FQ8IUX4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
APOBEC3FQ8IUX4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
APOBEC3FQ8IUX4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
APOBEC3FQ8IUX4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
APOBEC3FQ8IUX4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC23.93■■□□□ 1.42
APOBEC3FQ8IUX4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
APOBEC3FQ8IUX4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC23.93■■□□□ 1.42
APOBEC3FQ8IUX4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC23.93■■□□□ 1.42
APOBEC3FQ8IUX4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC23.93■■□□□ 1.42
APOBEC3FQ8IUX4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
APOBEC3FQ8IUX4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC23.93■■□□□ 1.42
APOBEC3FQ8IUX4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.93■■□□□ 1.42
APOBEC3FQ8IUX4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
APOBEC3FQ8IUX4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
APOBEC3FQ8IUX4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC23.92■■□□□ 1.42
APOBEC3FQ8IUX4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
APOBEC3FQ8IUX4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
APOBEC3FQ8IUX4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
APOBEC3FQ8IUX4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
APOBEC3FQ8IUX4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC23.92■■□□□ 1.42
APOBEC3FQ8IUX4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC23.92■■□□□ 1.42
APOBEC3FQ8IUX4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC23.92■■□□□ 1.42
APOBEC3FQ8IUX4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC23.92■■□□□ 1.42
APOBEC3FQ8IUX4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC23.92■■□□□ 1.42
APOBEC3FQ8IUX4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
APOBEC3FQ8IUX4 MIR2861-201ENST00000636310 90 ntBASIC23.92■■□□□ 1.42
APOBEC3FQ8IUX4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
APOBEC3FQ8IUX4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC23.92■■□□□ 1.42
APOBEC3FQ8IUX4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.92■■□□□ 1.42
APOBEC3FQ8IUX4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
APOBEC3FQ8IUX4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC23.91■■□□□ 1.42
APOBEC3FQ8IUX4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC23.91■■□□□ 1.42
APOBEC3FQ8IUX4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
APOBEC3FQ8IUX4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC23.91■■□□□ 1.42
APOBEC3FQ8IUX4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
APOBEC3FQ8IUX4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
APOBEC3FQ8IUX4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC23.91■■□□□ 1.42
APOBEC3FQ8IUX4 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC23.91■■□□□ 1.42
APOBEC3FQ8IUX4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
APOBEC3FQ8IUX4 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
APOBEC3FQ8IUX4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC23.91■■□□□ 1.42
APOBEC3FQ8IUX4 NAPSB-206ENST00000562112 1266 ntBASIC23.91■■□□□ 1.42
APOBEC3FQ8IUX4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC23.91■■□□□ 1.42
APOBEC3FQ8IUX4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC23.91■■□□□ 1.42
APOBEC3FQ8IUX4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
APOBEC3FQ8IUX4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
APOBEC3FQ8IUX4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
APOBEC3FQ8IUX4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
APOBEC3FQ8IUX4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
APOBEC3FQ8IUX4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC23.91■■□□□ 1.42
APOBEC3FQ8IUX4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC23.91■■□□□ 1.42
APOBEC3FQ8IUX4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
APOBEC3FQ8IUX4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
APOBEC3FQ8IUX4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
APOBEC3FQ8IUX4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
APOBEC3FQ8IUX4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
APOBEC3FQ8IUX4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
APOBEC3FQ8IUX4 KSR1P1-201ENST00000446298 240 ntBASIC23.9■■□□□ 1.42
APOBEC3FQ8IUX4 AC116562.2-201ENST00000507042 360 ntBASIC23.9■■□□□ 1.42
APOBEC3FQ8IUX4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC23.9■■□□□ 1.42
APOBEC3FQ8IUX4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
APOBEC3FQ8IUX4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
APOBEC3FQ8IUX4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
APOBEC3FQ8IUX4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
APOBEC3FQ8IUX4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
APOBEC3FQ8IUX4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC23.9■■□□□ 1.42
APOBEC3FQ8IUX4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.89■■□□□ 1.42
APOBEC3FQ8IUX4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC23.89■■□□□ 1.42
APOBEC3FQ8IUX4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.89■■□□□ 1.42
APOBEC3FQ8IUX4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC23.89■■□□□ 1.42
APOBEC3FQ8IUX4 DUT-205ENST00000558813 769 ntTSL 2 BASIC23.89■■□□□ 1.41
APOBEC3FQ8IUX4 FITM1-202ENST00000559294 800 ntBASIC23.89■■□□□ 1.41
APOBEC3FQ8IUX4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC23.89■■□□□ 1.41
APOBEC3FQ8IUX4 NME3-204ENST00000563498 920 ntTSL 2 BASIC23.89■■□□□ 1.41
APOBEC3FQ8IUX4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC23.89■■□□□ 1.41
APOBEC3FQ8IUX4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC23.89■■□□□ 1.41
APOBEC3FQ8IUX4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
APOBEC3FQ8IUX4 KRT18P22-201ENST00000402024 1347 ntBASIC23.88■■□□□ 1.41
APOBEC3FQ8IUX4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
APOBEC3FQ8IUX4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
APOBEC3FQ8IUX4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC23.88■■□□□ 1.41
APOBEC3FQ8IUX4 NIFKP9-201ENST00000419265 221 ntBASIC23.88■■□□□ 1.41
APOBEC3FQ8IUX4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC23.88■■□□□ 1.41
APOBEC3FQ8IUX4 KRT18P57-201ENST00000443599 1254 ntBASIC23.88■■□□□ 1.41
APOBEC3FQ8IUX4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC23.88■■□□□ 1.41
APOBEC3FQ8IUX4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC23.88■■□□□ 1.41
APOBEC3FQ8IUX4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
APOBEC3FQ8IUX4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
APOBEC3FQ8IUX4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms