Protein–RNA interactions for Protein: Q86T23

CROCCP2, Putative ciliary rootlet coiled-coil protein-like 1 protein, humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2Q86T23 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CROCCP2Q86T23 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
CROCCP2Q86T23 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CROCCP2Q86T23 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CROCCP2Q86T23 TREX1-205ENST00000625293 1783 ntBASIC20.5■□□□□ 0.87
CROCCP2Q86T23 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CROCCP2Q86T23 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CROCCP2Q86T23 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CROCCP2Q86T23 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.5■□□□□ 0.87
CROCCP2Q86T23 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CROCCP2Q86T23 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
CROCCP2Q86T23 BX842568.3-201ENST00000418104 571 ntBASIC20.5■□□□□ 0.87
CROCCP2Q86T23 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.5■□□□□ 0.87
CROCCP2Q86T23 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CROCCP2Q86T23 AC008175.2-201ENST00000612840 297 ntBASIC20.5■□□□□ 0.87
CROCCP2Q86T23 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CROCCP2Q86T23 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CROCCP2Q86T23 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CROCCP2Q86T23 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CROCCP2Q86T23 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CROCCP2Q86T23 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CROCCP2Q86T23 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CROCCP2Q86T23 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CROCCP2Q86T23 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.5■□□□□ 0.87
CROCCP2Q86T23 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.5■□□□□ 0.87
CROCCP2Q86T23 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CROCCP2Q86T23 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CROCCP2Q86T23 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.49■□□□□ 0.87
CROCCP2Q86T23 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CROCCP2Q86T23 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CROCCP2Q86T23 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.49■□□□□ 0.87
CROCCP2Q86T23 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CROCCP2Q86T23 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CROCCP2Q86T23 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CROCCP2Q86T23 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CROCCP2Q86T23 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.49■□□□□ 0.87
CROCCP2Q86T23 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.49■□□□□ 0.87
CROCCP2Q86T23 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.49■□□□□ 0.87
CROCCP2Q86T23 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CROCCP2Q86T23 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.49■□□□□ 0.87
CROCCP2Q86T23 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CROCCP2Q86T23 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CROCCP2Q86T23 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CROCCP2Q86T23 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CROCCP2Q86T23 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.49■□□□□ 0.87
CROCCP2Q86T23 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.49■□□□□ 0.87
CROCCP2Q86T23 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.49■□□□□ 0.87
CROCCP2Q86T23 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CROCCP2Q86T23 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.48■□□□□ 0.87
CROCCP2Q86T23 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CROCCP2Q86T23 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CROCCP2Q86T23 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CROCCP2Q86T23 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CROCCP2Q86T23 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.48■□□□□ 0.87
CROCCP2Q86T23 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CROCCP2Q86T23 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CROCCP2Q86T23 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CROCCP2Q86T23 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CROCCP2Q86T23 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CROCCP2Q86T23 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.48■□□□□ 0.87
CROCCP2Q86T23 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CROCCP2Q86T23 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CROCCP2Q86T23 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CROCCP2Q86T23 AL691432.2-201ENST00000607222 2038 ntBASIC20.48■□□□□ 0.87
CROCCP2Q86T23 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.48■□□□□ 0.87
CROCCP2Q86T23 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CROCCP2Q86T23 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CROCCP2Q86T23 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CROCCP2Q86T23 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CROCCP2Q86T23 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CROCCP2Q86T23 BX119927.1-201ENST00000636596 1552 ntBASIC20.47■□□□□ 0.87
CROCCP2Q86T23 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CROCCP2Q86T23 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.47■□□□□ 0.87
CROCCP2Q86T23 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CROCCP2Q86T23 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.47■□□□□ 0.87
CROCCP2Q86T23 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.47■□□□□ 0.87
CROCCP2Q86T23 AC245052.3-201ENST00000450182 901 ntBASIC20.47■□□□□ 0.87
CROCCP2Q86T23 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CROCCP2Q86T23 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CROCCP2Q86T23 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CROCCP2Q86T23 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CROCCP2Q86T23 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CROCCP2Q86T23 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CROCCP2Q86T23 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CROCCP2Q86T23 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CROCCP2Q86T23 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CROCCP2Q86T23 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CROCCP2Q86T23 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CROCCP2Q86T23 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CROCCP2Q86T23 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.46■□□□□ 0.87
CROCCP2Q86T23 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CROCCP2Q86T23 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CROCCP2Q86T23 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.46■□□□□ 0.87
CROCCP2Q86T23 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CROCCP2Q86T23 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CROCCP2Q86T23 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CROCCP2Q86T23 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.46■□□□□ 0.87
CROCCP2Q86T23 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CROCCP2Q86T23 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.46■□□□□ 0.87
CROCCP2Q86T23 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms