Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHFQ7M4L6 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHFQ7M4L6 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHFQ7M4L6 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHFQ7M4L6 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SHFQ7M4L6 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHFQ7M4L6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
SHFQ7M4L6 KRT16P2-201ENST00000414673 1423 ntBASIC18.23■□□□□ 0.51
SHFQ7M4L6 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHFQ7M4L6 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.23■□□□□ 0.51
SHFQ7M4L6 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SHFQ7M4L6 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SHFQ7M4L6 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SHFQ7M4L6 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHFQ7M4L6 AC098818.2-201ENST00000564925 2320 ntBASIC18.22■□□□□ 0.51
SHFQ7M4L6 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHFQ7M4L6 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHFQ7M4L6 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
SHFQ7M4L6 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SHFQ7M4L6 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SHFQ7M4L6 AC245052.3-201ENST00000450182 901 ntBASIC18.22■□□□□ 0.51
SHFQ7M4L6 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHFQ7M4L6 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SHFQ7M4L6 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SHFQ7M4L6 RARRES2P11-201ENST00000635158 484 ntBASIC18.22■□□□□ 0.51
SHFQ7M4L6 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SHFQ7M4L6 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.22■□□□□ 0.51
SHFQ7M4L6 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.22■□□□□ 0.51
SHFQ7M4L6 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHFQ7M4L6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.22■□□□□ 0.51
SHFQ7M4L6 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHFQ7M4L6 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SHFQ7M4L6 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SHFQ7M4L6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHFQ7M4L6 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SHFQ7M4L6 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.21■□□□□ 0.51
SHFQ7M4L6 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.21■□□□□ 0.51
SHFQ7M4L6 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.21■□□□□ 0.51
SHFQ7M4L6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.21■□□□□ 0.51
SHFQ7M4L6 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.21■□□□□ 0.51
SHFQ7M4L6 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHFQ7M4L6 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.21■□□□□ 0.51
SHFQ7M4L6 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHFQ7M4L6 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHFQ7M4L6 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHFQ7M4L6 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.21■□□□□ 0.51
SHFQ7M4L6 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHFQ7M4L6 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.21■□□□□ 0.51
SHFQ7M4L6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SHFQ7M4L6 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHFQ7M4L6 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
SHFQ7M4L6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
SHFQ7M4L6 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.5
SHFQ7M4L6 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
SHFQ7M4L6 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
SHFQ7M4L6 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SHFQ7M4L6 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHFQ7M4L6 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHFQ7M4L6 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHFQ7M4L6 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHFQ7M4L6 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SHFQ7M4L6 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SHFQ7M4L6 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
SHFQ7M4L6 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHFQ7M4L6 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHFQ7M4L6 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SHFQ7M4L6 AC027612.3-201ENST00000413684 1047 ntBASIC18.2■□□□□ 0.5
SHFQ7M4L6 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SHFQ7M4L6 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.2■□□□□ 0.5
SHFQ7M4L6 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.2■□□□□ 0.5
SHFQ7M4L6 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.2■□□□□ 0.5
SHFQ7M4L6 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SHFQ7M4L6 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
SHFQ7M4L6 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
SHFQ7M4L6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SHFQ7M4L6 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHFQ7M4L6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHFQ7M4L6 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHFQ7M4L6 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHFQ7M4L6 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHFQ7M4L6 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.19■□□□□ 0.5
SHFQ7M4L6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHFQ7M4L6 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHFQ7M4L6 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHFQ7M4L6 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SHFQ7M4L6 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHFQ7M4L6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.19■□□□□ 0.5
SHFQ7M4L6 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.19■□□□□ 0.5
SHFQ7M4L6 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.19■□□□□ 0.5
SHFQ7M4L6 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHFQ7M4L6 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHFQ7M4L6 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.19■□□□□ 0.5
SHFQ7M4L6 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SHFQ7M4L6 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SHFQ7M4L6 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SHFQ7M4L6 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.19■□□□□ 0.5
SHFQ7M4L6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.19■□□□□ 0.5
SHFQ7M4L6 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.19■□□□□ 0.5
SHFQ7M4L6 AC005837.3-201ENST00000612163 286 ntBASIC18.19■□□□□ 0.5
SHFQ7M4L6 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms