Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 AC008550.1-201ENST00000511500 884 ntBASIC21.67■■□□□ 1.06
DCLRE1AQ6PJP8 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.67■■□□□ 1.06
DCLRE1AQ6PJP8 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
DCLRE1AQ6PJP8 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.67■■□□□ 1.06
DCLRE1AQ6PJP8 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.67■■□□□ 1.06
DCLRE1AQ6PJP8 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.67■■□□□ 1.06
DCLRE1AQ6PJP8 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.67■■□□□ 1.06
DCLRE1AQ6PJP8 MTDHP1-201ENST00000605323 784 ntBASIC21.67■■□□□ 1.06
DCLRE1AQ6PJP8 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.67■■□□□ 1.06
DCLRE1AQ6PJP8 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
DCLRE1AQ6PJP8 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
DCLRE1AQ6PJP8 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.67■■□□□ 1.06
DCLRE1AQ6PJP8 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
DCLRE1AQ6PJP8 PLK5-205ENST00000642079 1969 ntBASIC21.67■■□□□ 1.06
DCLRE1AQ6PJP8 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
DCLRE1AQ6PJP8 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DCLRE1AQ6PJP8 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DCLRE1AQ6PJP8 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
DCLRE1AQ6PJP8 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.66■■□□□ 1.06
DCLRE1AQ6PJP8 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.66■■□□□ 1.06
DCLRE1AQ6PJP8 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
DCLRE1AQ6PJP8 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.66■■□□□ 1.06
DCLRE1AQ6PJP8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
DCLRE1AQ6PJP8 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
DCLRE1AQ6PJP8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
DCLRE1AQ6PJP8 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
DCLRE1AQ6PJP8 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
DCLRE1AQ6PJP8 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.66■■□□□ 1.06
DCLRE1AQ6PJP8 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
DCLRE1AQ6PJP8 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.66■■□□□ 1.06
DCLRE1AQ6PJP8 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.66■■□□□ 1.06
DCLRE1AQ6PJP8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DCLRE1AQ6PJP8 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DCLRE1AQ6PJP8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
DCLRE1AQ6PJP8 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
DCLRE1AQ6PJP8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
DCLRE1AQ6PJP8 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.65■■□□□ 1.06
DCLRE1AQ6PJP8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DCLRE1AQ6PJP8 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DCLRE1AQ6PJP8 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
DCLRE1AQ6PJP8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
DCLRE1AQ6PJP8 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.65■■□□□ 1.06
DCLRE1AQ6PJP8 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DCLRE1AQ6PJP8 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.65■■□□□ 1.06
DCLRE1AQ6PJP8 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DCLRE1AQ6PJP8 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.65■■□□□ 1.06
DCLRE1AQ6PJP8 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
DCLRE1AQ6PJP8 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
DCLRE1AQ6PJP8 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
DCLRE1AQ6PJP8 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
DCLRE1AQ6PJP8 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
DCLRE1AQ6PJP8 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
DCLRE1AQ6PJP8 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.64■■□□□ 1.06
DCLRE1AQ6PJP8 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.64■■□□□ 1.06
DCLRE1AQ6PJP8 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
DCLRE1AQ6PJP8 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
DCLRE1AQ6PJP8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.05
DCLRE1AQ6PJP8 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
DCLRE1AQ6PJP8 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.64■■□□□ 1.05
DCLRE1AQ6PJP8 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
DCLRE1AQ6PJP8 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.64■■□□□ 1.05
DCLRE1AQ6PJP8 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.64■■□□□ 1.05
DCLRE1AQ6PJP8 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.64■■□□□ 1.05
DCLRE1AQ6PJP8 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
DCLRE1AQ6PJP8 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
DCLRE1AQ6PJP8 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
DCLRE1AQ6PJP8 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.64■■□□□ 1.05
DCLRE1AQ6PJP8 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
DCLRE1AQ6PJP8 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
DCLRE1AQ6PJP8 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DCLRE1AQ6PJP8 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
DCLRE1AQ6PJP8 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
DCLRE1AQ6PJP8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DCLRE1AQ6PJP8 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DCLRE1AQ6PJP8 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DCLRE1AQ6PJP8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DCLRE1AQ6PJP8 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DCLRE1AQ6PJP8 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.63■■□□□ 1.05
DCLRE1AQ6PJP8 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.63■■□□□ 1.05
DCLRE1AQ6PJP8 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DCLRE1AQ6PJP8 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
DCLRE1AQ6PJP8 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.63■■□□□ 1.05
DCLRE1AQ6PJP8 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DCLRE1AQ6PJP8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.63■■□□□ 1.05
DCLRE1AQ6PJP8 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.63■■□□□ 1.05
DCLRE1AQ6PJP8 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
DCLRE1AQ6PJP8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.63■■□□□ 1.05
DCLRE1AQ6PJP8 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.63■■□□□ 1.05
DCLRE1AQ6PJP8 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DCLRE1AQ6PJP8 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
DCLRE1AQ6PJP8 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DCLRE1AQ6PJP8 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DCLRE1AQ6PJP8 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DCLRE1AQ6PJP8 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.63■■□□□ 1.05
DCLRE1AQ6PJP8 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DCLRE1AQ6PJP8 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
DCLRE1AQ6PJP8 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
DCLRE1AQ6PJP8 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DCLRE1AQ6PJP8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
DCLRE1AQ6PJP8 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms