Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
C11orf88Q6PI97 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
C11orf88Q6PI97 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
C11orf88Q6PI97 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
C11orf88Q6PI97 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
C11orf88Q6PI97 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
C11orf88Q6PI97 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
C11orf88Q6PI97 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
C11orf88Q6PI97 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.53■□□□□ 0.4
C11orf88Q6PI97 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
C11orf88Q6PI97 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.53■□□□□ 0.4
C11orf88Q6PI97 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
C11orf88Q6PI97 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.53■□□□□ 0.4
C11orf88Q6PI97 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.53■□□□□ 0.4
C11orf88Q6PI97 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.53■□□□□ 0.4
C11orf88Q6PI97 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
C11orf88Q6PI97 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
C11orf88Q6PI97 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
C11orf88Q6PI97 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
C11orf88Q6PI97 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
C11orf88Q6PI97 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
C11orf88Q6PI97 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
C11orf88Q6PI97 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
C11orf88Q6PI97 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
C11orf88Q6PI97 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.52■□□□□ 0.4
C11orf88Q6PI97 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
C11orf88Q6PI97 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
C11orf88Q6PI97 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.52■□□□□ 0.4
C11orf88Q6PI97 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
C11orf88Q6PI97 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
C11orf88Q6PI97 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
C11orf88Q6PI97 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
C11orf88Q6PI97 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
C11orf88Q6PI97 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
C11orf88Q6PI97 MIR572-201ENST00000384983 95 ntBASIC17.52■□□□□ 0.4
C11orf88Q6PI97 AC123595.1-201ENST00000440769 1046 ntBASIC17.52■□□□□ 0.4
C11orf88Q6PI97 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
C11orf88Q6PI97 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.52■□□□□ 0.4
C11orf88Q6PI97 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.52■□□□□ 0.4
C11orf88Q6PI97 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.52■□□□□ 0.4
C11orf88Q6PI97 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
C11orf88Q6PI97 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.52■□□□□ 0.4
C11orf88Q6PI97 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
C11orf88Q6PI97 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
C11orf88Q6PI97 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
C11orf88Q6PI97 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
C11orf88Q6PI97 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
C11orf88Q6PI97 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.51■□□□□ 0.39
C11orf88Q6PI97 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C11orf88Q6PI97 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C11orf88Q6PI97 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
C11orf88Q6PI97 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
C11orf88Q6PI97 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C11orf88Q6PI97 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
C11orf88Q6PI97 AC027612.3-201ENST00000413684 1047 ntBASIC17.51■□□□□ 0.39
C11orf88Q6PI97 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C11orf88Q6PI97 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
C11orf88Q6PI97 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.51■□□□□ 0.39
C11orf88Q6PI97 AP005435.1-201ENST00000529293 1178 ntBASIC17.51■□□□□ 0.39
C11orf88Q6PI97 AC010525.1-201ENST00000585559 441 ntBASIC17.51■□□□□ 0.39
C11orf88Q6PI97 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.51■□□□□ 0.39
C11orf88Q6PI97 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
C11orf88Q6PI97 OR6D1P-202ENST00000641007 5290 ntBASIC17.51■□□□□ 0.39
C11orf88Q6PI97 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
C11orf88Q6PI97 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
C11orf88Q6PI97 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
C11orf88Q6PI97 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C11orf88Q6PI97 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C11orf88Q6PI97 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
C11orf88Q6PI97 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
C11orf88Q6PI97 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.51■□□□□ 0.39
C11orf88Q6PI97 AC027702.1-201ENST00000563810 1770 ntBASIC17.51■□□□□ 0.39
C11orf88Q6PI97 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.5■□□□□ 0.39
C11orf88Q6PI97 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
C11orf88Q6PI97 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C11orf88Q6PI97 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.5■□□□□ 0.39
C11orf88Q6PI97 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
C11orf88Q6PI97 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C11orf88Q6PI97 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C11orf88Q6PI97 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
C11orf88Q6PI97 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C11orf88Q6PI97 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C11orf88Q6PI97 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.5■□□□□ 0.39
C11orf88Q6PI97 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.5■□□□□ 0.39
C11orf88Q6PI97 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C11orf88Q6PI97 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.5■□□□□ 0.39
C11orf88Q6PI97 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.5■□□□□ 0.39
C11orf88Q6PI97 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
C11orf88Q6PI97 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
C11orf88Q6PI97 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
C11orf88Q6PI97 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.5■□□□□ 0.39
C11orf88Q6PI97 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C11orf88Q6PI97 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.5■□□□□ 0.39
C11orf88Q6PI97 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
C11orf88Q6PI97 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.5■□□□□ 0.39
C11orf88Q6PI97 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.5■□□□□ 0.39
C11orf88Q6PI97 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.5■□□□□ 0.39
C11orf88Q6PI97 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
C11orf88Q6PI97 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
C11orf88Q6PI97 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms