Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM53Q6P2H8 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM53Q6P2H8 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM53Q6P2H8 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM53Q6P2H8 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM53Q6P2H8 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM53Q6P2H8 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM53Q6P2H8 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.41■□□□□ 0.54
TMEM53Q6P2H8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM53Q6P2H8 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.41■□□□□ 0.54
TMEM53Q6P2H8 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM53Q6P2H8 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.41■□□□□ 0.54
TMEM53Q6P2H8 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TMEM53Q6P2H8 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM53Q6P2H8 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM53Q6P2H8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM53Q6P2H8 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
TMEM53Q6P2H8 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM53Q6P2H8 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
TMEM53Q6P2H8 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.4■□□□□ 0.54
TMEM53Q6P2H8 KRT19P1-201ENST00000405746 1186 ntBASIC18.4■□□□□ 0.54
TMEM53Q6P2H8 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.4■□□□□ 0.54
TMEM53Q6P2H8 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.4■□□□□ 0.54
TMEM53Q6P2H8 AC138907.5-202ENST00000569484 235 ntBASIC18.4■□□□□ 0.54
TMEM53Q6P2H8 NTF6G-201ENST00000591094 616 ntBASIC18.4■□□□□ 0.54
TMEM53Q6P2H8 AC104187.1-201ENST00000607510 612 ntBASIC18.4■□□□□ 0.54
TMEM53Q6P2H8 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.4■□□□□ 0.54
TMEM53Q6P2H8 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TMEM53Q6P2H8 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM53Q6P2H8 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM53Q6P2H8 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM53Q6P2H8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM53Q6P2H8 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM53Q6P2H8 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM53Q6P2H8 AC004854.2-201ENST00000608450 1441 ntBASIC18.4■□□□□ 0.54
TMEM53Q6P2H8 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TMEM53Q6P2H8 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.39■□□□□ 0.54
TMEM53Q6P2H8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
TMEM53Q6P2H8 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM53Q6P2H8 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM53Q6P2H8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
TMEM53Q6P2H8 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM53Q6P2H8 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM53Q6P2H8 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
TMEM53Q6P2H8 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.39■□□□□ 0.53
TMEM53Q6P2H8 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.39■□□□□ 0.53
TMEM53Q6P2H8 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM53Q6P2H8 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.39■□□□□ 0.53
TMEM53Q6P2H8 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM53Q6P2H8 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.39■□□□□ 0.53
TMEM53Q6P2H8 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM53Q6P2H8 AC120498.10-201ENST00000621827 505 ntBASIC18.39■□□□□ 0.53
TMEM53Q6P2H8 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TMEM53Q6P2H8 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM53Q6P2H8 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.39■□□□□ 0.53
TMEM53Q6P2H8 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM53Q6P2H8 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM53Q6P2H8 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM53Q6P2H8 AP004607.4-201ENST00000530158 1459 ntBASIC18.39■□□□□ 0.53
TMEM53Q6P2H8 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM53Q6P2H8 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TMEM53Q6P2H8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM53Q6P2H8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.38■□□□□ 0.53
TMEM53Q6P2H8 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM53Q6P2H8 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM53Q6P2H8 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM53Q6P2H8 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM53Q6P2H8 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM53Q6P2H8 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM53Q6P2H8 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TMEM53Q6P2H8 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM53Q6P2H8 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM53Q6P2H8 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.38■□□□□ 0.53
TMEM53Q6P2H8 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
TMEM53Q6P2H8 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM53Q6P2H8 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.38■□□□□ 0.53
TMEM53Q6P2H8 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM53Q6P2H8 POU5F1P4-201ENST00000413175 1085 ntBASIC18.38■□□□□ 0.53
TMEM53Q6P2H8 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM53Q6P2H8 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM53Q6P2H8 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TMEM53Q6P2H8 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM53Q6P2H8 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.38■□□□□ 0.53
TMEM53Q6P2H8 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM53Q6P2H8 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM53Q6P2H8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.38■□□□□ 0.53
TMEM53Q6P2H8 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM53Q6P2H8 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM53Q6P2H8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM53Q6P2H8 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM53Q6P2H8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.37■□□□□ 0.53
TMEM53Q6P2H8 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TMEM53Q6P2H8 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TMEM53Q6P2H8 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM53Q6P2H8 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TMEM53Q6P2H8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM53Q6P2H8 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM53Q6P2H8 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM53Q6P2H8 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM53Q6P2H8 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms