Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDPF1Q6NVV7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDPF1Q6NVV7 AC020763.4-201ENST00000623414 4170 ntBASIC15.33■□□□□ 0.04
CDPF1Q6NVV7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDPF1Q6NVV7 TCF3P1-201ENST00000423021 1937 ntBASIC15.33■□□□□ 0.04
CDPF1Q6NVV7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC15.33■□□□□ 0.04
CDPF1Q6NVV7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDPF1Q6NVV7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CDPF1Q6NVV7 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDPF1Q6NVV7 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
CDPF1Q6NVV7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
CDPF1Q6NVV7 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDPF1Q6NVV7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDPF1Q6NVV7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CDPF1Q6NVV7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDPF1Q6NVV7 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDPF1Q6NVV7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDPF1Q6NVV7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDPF1Q6NVV7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC15.32■□□□□ 0.04
CDPF1Q6NVV7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDPF1Q6NVV7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDPF1Q6NVV7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDPF1Q6NVV7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDPF1Q6NVV7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC15.32■□□□□ 0.04
CDPF1Q6NVV7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC15.32■□□□□ 0.04
CDPF1Q6NVV7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC15.32■□□□□ 0.04
CDPF1Q6NVV7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CDPF1Q6NVV7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDPF1Q6NVV7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDPF1Q6NVV7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDPF1Q6NVV7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC15.32■□□□□ 0.04
CDPF1Q6NVV7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDPF1Q6NVV7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDPF1Q6NVV7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDPF1Q6NVV7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDPF1Q6NVV7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDPF1Q6NVV7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDPF1Q6NVV7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.32■□□□□ 0.04
CDPF1Q6NVV7 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDPF1Q6NVV7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDPF1Q6NVV7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.32■□□□□ 0.04
CDPF1Q6NVV7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
CDPF1Q6NVV7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDPF1Q6NVV7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CDPF1Q6NVV7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDPF1Q6NVV7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDPF1Q6NVV7 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CDPF1Q6NVV7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDPF1Q6NVV7 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CDPF1Q6NVV7 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDPF1Q6NVV7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDPF1Q6NVV7 AK3-203ENST00000447596 705 ntTSL 2 BASIC15.31■□□□□ 0.04
CDPF1Q6NVV7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC15.31■□□□□ 0.04
CDPF1Q6NVV7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDPF1Q6NVV7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC15.31■□□□□ 0.04
CDPF1Q6NVV7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDPF1Q6NVV7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC15.31■□□□□ 0.04
CDPF1Q6NVV7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.31■□□□□ 0.04
CDPF1Q6NVV7 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDPF1Q6NVV7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDPF1Q6NVV7 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDPF1Q6NVV7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDPF1Q6NVV7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDPF1Q6NVV7 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDPF1Q6NVV7 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDPF1Q6NVV7 NOC2LP2-201ENST00000407594 1944 ntBASIC15.31■□□□□ 0.04
CDPF1Q6NVV7 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDPF1Q6NVV7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.3■□□□□ 0.04
CDPF1Q6NVV7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CDPF1Q6NVV7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDPF1Q6NVV7 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDPF1Q6NVV7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDPF1Q6NVV7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDPF1Q6NVV7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDPF1Q6NVV7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDPF1Q6NVV7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDPF1Q6NVV7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDPF1Q6NVV7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDPF1Q6NVV7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC15.3■□□□□ 0.04
CDPF1Q6NVV7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDPF1Q6NVV7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CDPF1Q6NVV7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDPF1Q6NVV7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC15.3■□□□□ 0.04
CDPF1Q6NVV7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC15.3■□□□□ 0.04
CDPF1Q6NVV7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDPF1Q6NVV7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC15.3■□□□□ 0.04
CDPF1Q6NVV7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.3■□□□□ 0.04
CDPF1Q6NVV7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC15.3■□□□□ 0.04
CDPF1Q6NVV7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CDPF1Q6NVV7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDPF1Q6NVV7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
CDPF1Q6NVV7 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDPF1Q6NVV7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.3■□□□□ 0.04
CDPF1Q6NVV7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDPF1Q6NVV7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CDPF1Q6NVV7 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CDPF1Q6NVV7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.29■□□□□ 0.04
CDPF1Q6NVV7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDPF1Q6NVV7 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CDPF1Q6NVV7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms