Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTCRAQ6ISU1 AC009947.2-201ENST00000444014 672 ntBASIC21■□□□□ 0.95
PTCRAQ6ISU1 AC023632.3-201ENST00000521633 145 ntBASIC21■□□□□ 0.95
PTCRAQ6ISU1 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21■□□□□ 0.95
PTCRAQ6ISU1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
PTCRAQ6ISU1 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21■□□□□ 0.95
PTCRAQ6ISU1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21■□□□□ 0.95
PTCRAQ6ISU1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21■□□□□ 0.95
PTCRAQ6ISU1 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTCRAQ6ISU1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTCRAQ6ISU1 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTCRAQ6ISU1 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTCRAQ6ISU1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTCRAQ6ISU1 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTCRAQ6ISU1 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTCRAQ6ISU1 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTCRAQ6ISU1 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
PTCRAQ6ISU1 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.99■□□□□ 0.95
PTCRAQ6ISU1 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
PTCRAQ6ISU1 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.99■□□□□ 0.95
PTCRAQ6ISU1 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.99■□□□□ 0.95
PTCRAQ6ISU1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.99■□□□□ 0.95
PTCRAQ6ISU1 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTCRAQ6ISU1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTCRAQ6ISU1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.99■□□□□ 0.95
PTCRAQ6ISU1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PTCRAQ6ISU1 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
PTCRAQ6ISU1 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
PTCRAQ6ISU1 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTCRAQ6ISU1 AL031133.1-201ENST00000406807 723 ntBASIC20.98■□□□□ 0.95
PTCRAQ6ISU1 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.98■□□□□ 0.95
PTCRAQ6ISU1 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.98■□□□□ 0.95
PTCRAQ6ISU1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.98■□□□□ 0.95
PTCRAQ6ISU1 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.98■□□□□ 0.95
PTCRAQ6ISU1 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.98■□□□□ 0.95
PTCRAQ6ISU1 AP000550.4-202ENST00000639755 178 ntBASIC20.98■□□□□ 0.95
PTCRAQ6ISU1 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.98■□□□□ 0.95
PTCRAQ6ISU1 MYC-208ENST00000641036 567 ntBASIC20.98■□□□□ 0.95
PTCRAQ6ISU1 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
PTCRAQ6ISU1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTCRAQ6ISU1 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTCRAQ6ISU1 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.98■□□□□ 0.95
PTCRAQ6ISU1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTCRAQ6ISU1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.97■□□□□ 0.95
PTCRAQ6ISU1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.97■□□□□ 0.95
PTCRAQ6ISU1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTCRAQ6ISU1 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTCRAQ6ISU1 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTCRAQ6ISU1 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTCRAQ6ISU1 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTCRAQ6ISU1 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTCRAQ6ISU1 TSPY14P-201ENST00000303979 915 ntBASIC20.97■□□□□ 0.95
PTCRAQ6ISU1 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.97■□□□□ 0.95
PTCRAQ6ISU1 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTCRAQ6ISU1 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.97■□□□□ 0.95
PTCRAQ6ISU1 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PTCRAQ6ISU1 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.97■□□□□ 0.95
PTCRAQ6ISU1 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.97■□□□□ 0.95
PTCRAQ6ISU1 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
PTCRAQ6ISU1 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
PTCRAQ6ISU1 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.97■□□□□ 0.95
PTCRAQ6ISU1 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTCRAQ6ISU1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTCRAQ6ISU1 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PTCRAQ6ISU1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PTCRAQ6ISU1 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTCRAQ6ISU1 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTCRAQ6ISU1 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTCRAQ6ISU1 FAM8A6P-201ENST00000407496 1135 ntBASIC20.96■□□□□ 0.95
PTCRAQ6ISU1 DUSP5P1-201ENST00000441325 1139 ntBASIC20.96■□□□□ 0.95
PTCRAQ6ISU1 AC128688.1-201ENST00000487626 519 ntBASIC20.96■□□□□ 0.95
PTCRAQ6ISU1 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.96■□□□□ 0.95
PTCRAQ6ISU1 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.96■□□□□ 0.95
PTCRAQ6ISU1 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.96■□□□□ 0.95
PTCRAQ6ISU1 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PTCRAQ6ISU1 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.96■□□□□ 0.95
PTCRAQ6ISU1 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.96■□□□□ 0.95
PTCRAQ6ISU1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
PTCRAQ6ISU1 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.96■□□□□ 0.95
PTCRAQ6ISU1 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTCRAQ6ISU1 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTCRAQ6ISU1 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.95■□□□□ 0.94
PTCRAQ6ISU1 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTCRAQ6ISU1 AL450487.1-201ENST00000426799 995 ntBASIC20.95■□□□□ 0.94
PTCRAQ6ISU1 AC117947.1-201ENST00000427448 529 ntBASIC20.95■□□□□ 0.94
PTCRAQ6ISU1 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
PTCRAQ6ISU1 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTCRAQ6ISU1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTCRAQ6ISU1 AL031985.4-201ENST00000642138 673 ntBASIC20.95■□□□□ 0.94
PTCRAQ6ISU1 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTCRAQ6ISU1 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PTCRAQ6ISU1 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTCRAQ6ISU1 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTCRAQ6ISU1 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTCRAQ6ISU1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
PTCRAQ6ISU1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.94■□□□□ 0.94
PTCRAQ6ISU1 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTCRAQ6ISU1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTCRAQ6ISU1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTCRAQ6ISU1 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms