Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LCN1P1Q5VSP4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCN1P1Q5VSP4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LCN1P1Q5VSP4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
LCN1P1Q5VSP4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
LCN1P1Q5VSP4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
LCN1P1Q5VSP4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.23■□□□□ 0.51
LCN1P1Q5VSP4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LCN1P1Q5VSP4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.23■□□□□ 0.51
LCN1P1Q5VSP4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LCN1P1Q5VSP4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.23■□□□□ 0.51
LCN1P1Q5VSP4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LCN1P1Q5VSP4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LCN1P1Q5VSP4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LCN1P1Q5VSP4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.23■□□□□ 0.51
LCN1P1Q5VSP4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LCN1P1Q5VSP4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
LCN1P1Q5VSP4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.23■□□□□ 0.51
LCN1P1Q5VSP4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.23■□□□□ 0.51
LCN1P1Q5VSP4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.23■□□□□ 0.51
LCN1P1Q5VSP4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.23■□□□□ 0.51
LCN1P1Q5VSP4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.23■□□□□ 0.51
LCN1P1Q5VSP4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LCN1P1Q5VSP4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
LCN1P1Q5VSP4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LCN1P1Q5VSP4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.23■□□□□ 0.51
LCN1P1Q5VSP4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LCN1P1Q5VSP4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LCN1P1Q5VSP4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LCN1P1Q5VSP4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
LCN1P1Q5VSP4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
LCN1P1Q5VSP4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
LCN1P1Q5VSP4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.22■□□□□ 0.51
LCN1P1Q5VSP4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LCN1P1Q5VSP4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LCN1P1Q5VSP4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
LCN1P1Q5VSP4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LCN1P1Q5VSP4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LCN1P1Q5VSP4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LCN1P1Q5VSP4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LCN1P1Q5VSP4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.22■□□□□ 0.51
LCN1P1Q5VSP4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.22■□□□□ 0.51
LCN1P1Q5VSP4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.22■□□□□ 0.51
LCN1P1Q5VSP4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LCN1P1Q5VSP4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LCN1P1Q5VSP4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LCN1P1Q5VSP4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LCN1P1Q5VSP4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LCN1P1Q5VSP4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LCN1P1Q5VSP4 AC116050.2-201ENST00000612102 1779 ntBASIC18.22■□□□□ 0.51
LCN1P1Q5VSP4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LCN1P1Q5VSP4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LCN1P1Q5VSP4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LCN1P1Q5VSP4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LCN1P1Q5VSP4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.21■□□□□ 0.51
LCN1P1Q5VSP4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LCN1P1Q5VSP4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
LCN1P1Q5VSP4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LCN1P1Q5VSP4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LCN1P1Q5VSP4 AC112907.3-201ENST00000577781 2400 ntBASIC18.21■□□□□ 0.51
LCN1P1Q5VSP4 AC098818.2-201ENST00000564925 2320 ntBASIC18.21■□□□□ 0.51
LCN1P1Q5VSP4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LCN1P1Q5VSP4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
LCN1P1Q5VSP4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LCN1P1Q5VSP4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LCN1P1Q5VSP4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.21■□□□□ 0.51
LCN1P1Q5VSP4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.21■□□□□ 0.51
LCN1P1Q5VSP4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.21■□□□□ 0.51
LCN1P1Q5VSP4 AL136967.2-201ENST00000623968 743 ntBASIC18.21■□□□□ 0.51
LCN1P1Q5VSP4 MIR2861-201ENST00000636310 90 ntBASIC18.21■□□□□ 0.51
LCN1P1Q5VSP4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LCN1P1Q5VSP4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LCN1P1Q5VSP4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LCN1P1Q5VSP4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LCN1P1Q5VSP4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LCN1P1Q5VSP4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.21■□□□□ 0.51
LCN1P1Q5VSP4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LCN1P1Q5VSP4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LCN1P1Q5VSP4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LCN1P1Q5VSP4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.2■□□□□ 0.5
LCN1P1Q5VSP4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LCN1P1Q5VSP4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
LCN1P1Q5VSP4 TCF3P1-201ENST00000423021 1937 ntBASIC18.2■□□□□ 0.5
LCN1P1Q5VSP4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LCN1P1Q5VSP4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
LCN1P1Q5VSP4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LCN1P1Q5VSP4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LCN1P1Q5VSP4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LCN1P1Q5VSP4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LCN1P1Q5VSP4 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.2■□□□□ 0.5
LCN1P1Q5VSP4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LCN1P1Q5VSP4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.2■□□□□ 0.5
LCN1P1Q5VSP4 AC110285.6-201ENST00000617652 491 ntBASIC18.2■□□□□ 0.5
LCN1P1Q5VSP4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.2■□□□□ 0.5
LCN1P1Q5VSP4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.2■□□□□ 0.5
LCN1P1Q5VSP4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LCN1P1Q5VSP4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LCN1P1Q5VSP4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LCN1P1Q5VSP4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LCN1P1Q5VSP4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms