Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SGO1Q5FBB7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SGO1Q5FBB7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SGO1Q5FBB7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SGO1Q5FBB7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.62■□□□□ 0.73
SGO1Q5FBB7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SGO1Q5FBB7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SGO1Q5FBB7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SGO1Q5FBB7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SGO1Q5FBB7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.62■□□□□ 0.73
SGO1Q5FBB7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.62■□□□□ 0.73
SGO1Q5FBB7 AC137761.2-201ENST00000561729 223 ntBASIC19.62■□□□□ 0.73
SGO1Q5FBB7 AC145350.3-201ENST00000569033 163 ntBASIC19.62■□□□□ 0.73
SGO1Q5FBB7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
SGO1Q5FBB7 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
SGO1Q5FBB7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SGO1Q5FBB7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.62■□□□□ 0.73
SGO1Q5FBB7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.62■□□□□ 0.73
SGO1Q5FBB7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.62■□□□□ 0.73
SGO1Q5FBB7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.62■□□□□ 0.73
SGO1Q5FBB7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SGO1Q5FBB7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SGO1Q5FBB7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.62■□□□□ 0.73
SGO1Q5FBB7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SGO1Q5FBB7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SGO1Q5FBB7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.61■□□□□ 0.73
SGO1Q5FBB7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SGO1Q5FBB7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SGO1Q5FBB7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SGO1Q5FBB7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.61■□□□□ 0.73
SGO1Q5FBB7 TERF1P5-201ENST00000477545 1207 ntBASIC19.61■□□□□ 0.73
SGO1Q5FBB7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SGO1Q5FBB7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SGO1Q5FBB7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SGO1Q5FBB7 AC010536.3-201ENST00000620306 533 ntBASIC19.61■□□□□ 0.73
SGO1Q5FBB7 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SGO1Q5FBB7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SGO1Q5FBB7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SGO1Q5FBB7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SGO1Q5FBB7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SGO1Q5FBB7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SGO1Q5FBB7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SGO1Q5FBB7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SGO1Q5FBB7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SGO1Q5FBB7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.6■□□□□ 0.73
SGO1Q5FBB7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SGO1Q5FBB7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SGO1Q5FBB7 KRT18P5-201ENST00000436075 1291 ntBASIC19.6■□□□□ 0.73
SGO1Q5FBB7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SGO1Q5FBB7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SGO1Q5FBB7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.6■□□□□ 0.73
SGO1Q5FBB7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SGO1Q5FBB7 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.6■□□□□ 0.73
SGO1Q5FBB7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SGO1Q5FBB7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SGO1Q5FBB7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
SGO1Q5FBB7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SGO1Q5FBB7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.6■□□□□ 0.73
SGO1Q5FBB7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.6■□□□□ 0.73
SGO1Q5FBB7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
SGO1Q5FBB7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.59■□□□□ 0.73
SGO1Q5FBB7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SGO1Q5FBB7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.59■□□□□ 0.73
SGO1Q5FBB7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SGO1Q5FBB7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
SGO1Q5FBB7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.59■□□□□ 0.73
SGO1Q5FBB7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.59■□□□□ 0.73
SGO1Q5FBB7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.59■□□□□ 0.73
SGO1Q5FBB7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.59■□□□□ 0.73
SGO1Q5FBB7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SGO1Q5FBB7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SGO1Q5FBB7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
SGO1Q5FBB7 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.59■□□□□ 0.73
SGO1Q5FBB7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SGO1Q5FBB7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SGO1Q5FBB7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SGO1Q5FBB7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
SGO1Q5FBB7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SGO1Q5FBB7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SGO1Q5FBB7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
SGO1Q5FBB7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SGO1Q5FBB7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SGO1Q5FBB7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SGO1Q5FBB7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SGO1Q5FBB7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SGO1Q5FBB7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
SGO1Q5FBB7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SGO1Q5FBB7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.58■□□□□ 0.72
SGO1Q5FBB7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.58■□□□□ 0.72
SGO1Q5FBB7 FAM21FP-204ENST00000608637 956 ntBASIC19.58■□□□□ 0.72
SGO1Q5FBB7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
SGO1Q5FBB7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.58■□□□□ 0.72
SGO1Q5FBB7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
SGO1Q5FBB7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SGO1Q5FBB7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SGO1Q5FBB7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SGO1Q5FBB7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SGO1Q5FBB7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.58■□□□□ 0.72
SGO1Q5FBB7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SGO1Q5FBB7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms