Protein–RNA interactions for Protein: Q587I9

SFT2D3, Vesicle transport protein SFT2C, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D3Q587I9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SFT2D3Q587I9 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SFT2D3Q587I9 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
SFT2D3Q587I9 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SFT2D3Q587I9 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SFT2D3Q587I9 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SFT2D3Q587I9 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.71■□□□□ 0.75
SFT2D3Q587I9 AL162377.1-201ENST00000618844 1793 ntBASIC19.71■□□□□ 0.75
SFT2D3Q587I9 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.71■□□□□ 0.75
SFT2D3Q587I9 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SFT2D3Q587I9 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SFT2D3Q587I9 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.71■□□□□ 0.75
SFT2D3Q587I9 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.71■□□□□ 0.75
SFT2D3Q587I9 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.71■□□□□ 0.75
SFT2D3Q587I9 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SFT2D3Q587I9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SFT2D3Q587I9 AC120498.10-201ENST00000621827 505 ntBASIC19.71■□□□□ 0.75
SFT2D3Q587I9 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SFT2D3Q587I9 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SFT2D3Q587I9 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.71■□□□□ 0.75
SFT2D3Q587I9 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SFT2D3Q587I9 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.71■□□□□ 0.75
SFT2D3Q587I9 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
SFT2D3Q587I9 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
SFT2D3Q587I9 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
SFT2D3Q587I9 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.71■□□□□ 0.75
SFT2D3Q587I9 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SFT2D3Q587I9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
SFT2D3Q587I9 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.7■□□□□ 0.74
SFT2D3Q587I9 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SFT2D3Q587I9 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SFT2D3Q587I9 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.7■□□□□ 0.74
SFT2D3Q587I9 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.7■□□□□ 0.74
SFT2D3Q587I9 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SFT2D3Q587I9 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SFT2D3Q587I9 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SFT2D3Q587I9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.7■□□□□ 0.74
SFT2D3Q587I9 AL512408.1-201ENST00000569378 2000 ntBASIC19.7■□□□□ 0.74
SFT2D3Q587I9 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SFT2D3Q587I9 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
SFT2D3Q587I9 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.7■□□□□ 0.74
SFT2D3Q587I9 POU5F1P4-201ENST00000413175 1085 ntBASIC19.7■□□□□ 0.74
SFT2D3Q587I9 AC026185.1-201ENST00000445748 174 ntBASIC19.7■□□□□ 0.74
SFT2D3Q587I9 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SFT2D3Q587I9 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.7■□□□□ 0.74
SFT2D3Q587I9 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.7■□□□□ 0.74
SFT2D3Q587I9 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.7■□□□□ 0.74
SFT2D3Q587I9 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.7■□□□□ 0.74
SFT2D3Q587I9 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SFT2D3Q587I9 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SFT2D3Q587I9 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SFT2D3Q587I9 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SFT2D3Q587I9 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.7■□□□□ 0.74
SFT2D3Q587I9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SFT2D3Q587I9 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SFT2D3Q587I9 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SFT2D3Q587I9 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SFT2D3Q587I9 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SFT2D3Q587I9 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SFT2D3Q587I9 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SFT2D3Q587I9 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SFT2D3Q587I9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SFT2D3Q587I9 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SFT2D3Q587I9 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SFT2D3Q587I9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SFT2D3Q587I9 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SFT2D3Q587I9 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.69■□□□□ 0.74
SFT2D3Q587I9 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SFT2D3Q587I9 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SFT2D3Q587I9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SFT2D3Q587I9 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.69■□□□□ 0.74
SFT2D3Q587I9 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.69■□□□□ 0.74
SFT2D3Q587I9 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.69■□□□□ 0.74
SFT2D3Q587I9 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.69■□□□□ 0.74
SFT2D3Q587I9 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SFT2D3Q587I9 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.69■□□□□ 0.74
SFT2D3Q587I9 RAP2CP1-201ENST00000605103 478 ntBASIC19.69■□□□□ 0.74
SFT2D3Q587I9 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.69■□□□□ 0.74
SFT2D3Q587I9 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SFT2D3Q587I9 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SFT2D3Q587I9 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SFT2D3Q587I9 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SFT2D3Q587I9 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SFT2D3Q587I9 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SFT2D3Q587I9 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
SFT2D3Q587I9 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SFT2D3Q587I9 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.69■□□□□ 0.74
SFT2D3Q587I9 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SFT2D3Q587I9 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.68■□□□□ 0.74
SFT2D3Q587I9 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SFT2D3Q587I9 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SFT2D3Q587I9 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SFT2D3Q587I9 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SFT2D3Q587I9 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
SFT2D3Q587I9 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.68■□□□□ 0.74
SFT2D3Q587I9 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.68■□□□□ 0.74
SFT2D3Q587I9 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SFT2D3Q587I9 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SFT2D3Q587I9 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SFT2D3Q587I9 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms