Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRFAM7AQ494W8 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRFAM7AQ494W8 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.62■□□□□ 0.41
CHRFAM7AQ494W8 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRFAM7AQ494W8 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHRFAM7AQ494W8 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRFAM7AQ494W8 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.62■□□□□ 0.41
CHRFAM7AQ494W8 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRFAM7AQ494W8 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRFAM7AQ494W8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRFAM7AQ494W8 HCG11-201ENST00000411553 5696 ntBASIC17.61■□□□□ 0.41
CHRFAM7AQ494W8 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.61■□□□□ 0.41
CHRFAM7AQ494W8 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRFAM7AQ494W8 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CHRFAM7AQ494W8 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHRFAM7AQ494W8 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRFAM7AQ494W8 PRORSD1P-201ENST00000295112 541 ntBASIC17.61■□□□□ 0.41
CHRFAM7AQ494W8 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CHRFAM7AQ494W8 AC098934.4-201ENST00000564127 592 ntBASIC17.61■□□□□ 0.41
CHRFAM7AQ494W8 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.61■□□□□ 0.41
CHRFAM7AQ494W8 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRFAM7AQ494W8 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRFAM7AQ494W8 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
CHRFAM7AQ494W8 AC073314.1-201ENST00000568729 2216 ntBASIC17.61■□□□□ 0.41
CHRFAM7AQ494W8 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRFAM7AQ494W8 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.61■□□□□ 0.41
CHRFAM7AQ494W8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.61■□□□□ 0.41
CHRFAM7AQ494W8 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.61■□□□□ 0.41
CHRFAM7AQ494W8 PLK5-205ENST00000642079 1969 ntBASIC17.6■□□□□ 0.41
CHRFAM7AQ494W8 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
CHRFAM7AQ494W8 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CHRFAM7AQ494W8 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRFAM7AQ494W8 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRFAM7AQ494W8 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.6■□□□□ 0.41
CHRFAM7AQ494W8 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHRFAM7AQ494W8 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.6■□□□□ 0.41
CHRFAM7AQ494W8 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.6■□□□□ 0.41
CHRFAM7AQ494W8 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.6■□□□□ 0.41
CHRFAM7AQ494W8 AP006587.3-201ENST00000525742 1516 ntBASIC17.6■□□□□ 0.41
CHRFAM7AQ494W8 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.6■□□□□ 0.41
CHRFAM7AQ494W8 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHRFAM7AQ494W8 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRFAM7AQ494W8 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.6■□□□□ 0.41
CHRFAM7AQ494W8 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRFAM7AQ494W8 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRFAM7AQ494W8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.6■□□□□ 0.41
CHRFAM7AQ494W8 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRFAM7AQ494W8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CHRFAM7AQ494W8 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHRFAM7AQ494W8 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHRFAM7AQ494W8 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHRFAM7AQ494W8 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHRFAM7AQ494W8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.59■□□□□ 0.41
CHRFAM7AQ494W8 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CHRFAM7AQ494W8 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHRFAM7AQ494W8 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHRFAM7AQ494W8 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.59■□□□□ 0.41
CHRFAM7AQ494W8 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHRFAM7AQ494W8 CNN2P6-201ENST00000439038 900 ntBASIC17.59■□□□□ 0.41
CHRFAM7AQ494W8 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHRFAM7AQ494W8 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHRFAM7AQ494W8 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHRFAM7AQ494W8 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHRFAM7AQ494W8 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHRFAM7AQ494W8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHRFAM7AQ494W8 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHRFAM7AQ494W8 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHRFAM7AQ494W8 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CHRFAM7AQ494W8 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
CHRFAM7AQ494W8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.58■□□□□ 0.41
CHRFAM7AQ494W8 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CHRFAM7AQ494W8 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHRFAM7AQ494W8 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
CHRFAM7AQ494W8 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.41
CHRFAM7AQ494W8 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHRFAM7AQ494W8 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHRFAM7AQ494W8 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHRFAM7AQ494W8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CHRFAM7AQ494W8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.58■□□□□ 0.4
CHRFAM7AQ494W8 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHRFAM7AQ494W8 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CHRFAM7AQ494W8 AC010536.3-201ENST00000620306 533 ntBASIC17.58■□□□□ 0.4
CHRFAM7AQ494W8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHRFAM7AQ494W8 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHRFAM7AQ494W8 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CHRFAM7AQ494W8 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.58■□□□□ 0.4
CHRFAM7AQ494W8 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHRFAM7AQ494W8 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHRFAM7AQ494W8 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.58■□□□□ 0.4
CHRFAM7AQ494W8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHRFAM7AQ494W8 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRFAM7AQ494W8 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRFAM7AQ494W8 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CHRFAM7AQ494W8 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CHRFAM7AQ494W8 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRFAM7AQ494W8 RNF165-205ENST00000588679 2904 ntBASIC17.57■□□□□ 0.4
CHRFAM7AQ494W8 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.57■□□□□ 0.4
CHRFAM7AQ494W8 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CHRFAM7AQ494W8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
CHRFAM7AQ494W8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms