Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RSPO4Q2I0M5 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
RSPO4Q2I0M5 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RSPO4Q2I0M5 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RSPO4Q2I0M5 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RSPO4Q2I0M5 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RSPO4Q2I0M5 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RSPO4Q2I0M5 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RSPO4Q2I0M5 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RSPO4Q2I0M5 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.69■□□□□ 0.74
RSPO4Q2I0M5 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RSPO4Q2I0M5 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RSPO4Q2I0M5 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RSPO4Q2I0M5 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RSPO4Q2I0M5 RNF152P1-201ENST00000397754 604 ntBASIC19.69■□□□□ 0.74
RSPO4Q2I0M5 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
RSPO4Q2I0M5 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.69■□□□□ 0.74
RSPO4Q2I0M5 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.69■□□□□ 0.74
RSPO4Q2I0M5 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.69■□□□□ 0.74
RSPO4Q2I0M5 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RSPO4Q2I0M5 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.69■□□□□ 0.74
RSPO4Q2I0M5 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.69■□□□□ 0.74
RSPO4Q2I0M5 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RSPO4Q2I0M5 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RSPO4Q2I0M5 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
RSPO4Q2I0M5 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RSPO4Q2I0M5 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.69■□□□□ 0.74
RSPO4Q2I0M5 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RSPO4Q2I0M5 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RSPO4Q2I0M5 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RSPO4Q2I0M5 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RSPO4Q2I0M5 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RSPO4Q2I0M5 IER3-202ENST00000376377 1350 ntBASIC19.69■□□□□ 0.74
RSPO4Q2I0M5 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RSPO4Q2I0M5 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RSPO4Q2I0M5 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RSPO4Q2I0M5 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RSPO4Q2I0M5 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.68■□□□□ 0.74
RSPO4Q2I0M5 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RSPO4Q2I0M5 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.68■□□□□ 0.74
RSPO4Q2I0M5 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RSPO4Q2I0M5 ANOS2P-203ENST00000472227 1816 ntBASIC19.68■□□□□ 0.74
RSPO4Q2I0M5 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RSPO4Q2I0M5 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.68■□□□□ 0.74
RSPO4Q2I0M5 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.68■□□□□ 0.74
RSPO4Q2I0M5 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.68■□□□□ 0.74
RSPO4Q2I0M5 KSR1P1-201ENST00000446298 240 ntBASIC19.68■□□□□ 0.74
RSPO4Q2I0M5 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.68■□□□□ 0.74
RSPO4Q2I0M5 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.68■□□□□ 0.74
RSPO4Q2I0M5 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RSPO4Q2I0M5 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.68■□□□□ 0.74
RSPO4Q2I0M5 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.68■□□□□ 0.74
RSPO4Q2I0M5 AC139887.4-201ENST00000607877 719 ntBASIC19.68■□□□□ 0.74
RSPO4Q2I0M5 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.68■□□□□ 0.74
RSPO4Q2I0M5 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RSPO4Q2I0M5 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.68■□□□□ 0.74
RSPO4Q2I0M5 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RSPO4Q2I0M5 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RSPO4Q2I0M5 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.68■□□□□ 0.74
RSPO4Q2I0M5 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RSPO4Q2I0M5 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RSPO4Q2I0M5 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RSPO4Q2I0M5 KRT16P1-201ENST00000399124 1418 ntBASIC19.68■□□□□ 0.74
RSPO4Q2I0M5 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RSPO4Q2I0M5 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RSPO4Q2I0M5 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.67■□□□□ 0.74
RSPO4Q2I0M5 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.67■□□□□ 0.74
RSPO4Q2I0M5 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RSPO4Q2I0M5 TSPY14P-201ENST00000303979 915 ntBASIC19.67■□□□□ 0.74
RSPO4Q2I0M5 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RSPO4Q2I0M5 PGM5P4-201ENST00000421970 445 ntBASIC19.67■□□□□ 0.74
RSPO4Q2I0M5 FAM207BP-201ENST00000447172 505 ntBASIC19.67■□□□□ 0.74
RSPO4Q2I0M5 AC092647.4-201ENST00000457211 535 ntBASIC19.67■□□□□ 0.74
RSPO4Q2I0M5 AC128688.1-201ENST00000487626 519 ntBASIC19.67■□□□□ 0.74
RSPO4Q2I0M5 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.67■□□□□ 0.74
RSPO4Q2I0M5 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.67■□□□□ 0.74
RSPO4Q2I0M5 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.67■□□□□ 0.74
RSPO4Q2I0M5 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RSPO4Q2I0M5 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RSPO4Q2I0M5 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.67■□□□□ 0.74
RSPO4Q2I0M5 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.67■□□□□ 0.74
RSPO4Q2I0M5 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RSPO4Q2I0M5 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.67■□□□□ 0.74
RSPO4Q2I0M5 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RSPO4Q2I0M5 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RSPO4Q2I0M5 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RSPO4Q2I0M5 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RSPO4Q2I0M5 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RSPO4Q2I0M5 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RSPO4Q2I0M5 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.66■□□□□ 0.74
RSPO4Q2I0M5 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RSPO4Q2I0M5 FAM86EP-206ENST00000510506 987 ntBASIC19.66■□□□□ 0.74
RSPO4Q2I0M5 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
RSPO4Q2I0M5 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.66■□□□□ 0.74
RSPO4Q2I0M5 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.66■□□□□ 0.74
RSPO4Q2I0M5 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RSPO4Q2I0M5 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RSPO4Q2I0M5 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RSPO4Q2I0M5 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.66■□□□□ 0.74
RSPO4Q2I0M5 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms