Protein–RNA interactions for Protein: Q0VAM2

RASGEF1B, Ras-GEF domain-containing family member 1B, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1BQ0VAM2 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RASGEF1BQ0VAM2 SLC29A4P1-201ENST00000398760 971 ntBASIC18.33■□□□□ 0.52
RASGEF1BQ0VAM2 HLA-L-209ENST00000420110 1011 ntBASIC18.33■□□□□ 0.52
RASGEF1BQ0VAM2 AC093787.1-201ENST00000450396 207 ntBASIC18.33■□□□□ 0.52
RASGEF1BQ0VAM2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.33■□□□□ 0.52
RASGEF1BQ0VAM2 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.33■□□□□ 0.52
RASGEF1BQ0VAM2 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.33■□□□□ 0.52
RASGEF1BQ0VAM2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.33■□□□□ 0.52
RASGEF1BQ0VAM2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RASGEF1BQ0VAM2 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
RASGEF1BQ0VAM2 MKRN4P-201ENST00000444706 1521 ntBASIC18.33■□□□□ 0.52
RASGEF1BQ0VAM2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RASGEF1BQ0VAM2 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RASGEF1BQ0VAM2 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RASGEF1BQ0VAM2 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RASGEF1BQ0VAM2 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RASGEF1BQ0VAM2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RASGEF1BQ0VAM2 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RASGEF1BQ0VAM2 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RASGEF1BQ0VAM2 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RASGEF1BQ0VAM2 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.32■□□□□ 0.52
RASGEF1BQ0VAM2 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RASGEF1BQ0VAM2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RASGEF1BQ0VAM2 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RASGEF1BQ0VAM2 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
RASGEF1BQ0VAM2 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.32■□□□□ 0.52
RASGEF1BQ0VAM2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.32■□□□□ 0.52
RASGEF1BQ0VAM2 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.32■□□□□ 0.52
RASGEF1BQ0VAM2 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RASGEF1BQ0VAM2 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RASGEF1BQ0VAM2 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RASGEF1BQ0VAM2 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RASGEF1BQ0VAM2 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RASGEF1BQ0VAM2 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
RASGEF1BQ0VAM2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RASGEF1BQ0VAM2 AC010980.2-201ENST00000587099 1412 ntBASIC18.32■□□□□ 0.52
RASGEF1BQ0VAM2 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RASGEF1BQ0VAM2 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RASGEF1BQ0VAM2 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RASGEF1BQ0VAM2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RASGEF1BQ0VAM2 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RASGEF1BQ0VAM2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RASGEF1BQ0VAM2 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RASGEF1BQ0VAM2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
RASGEF1BQ0VAM2 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RASGEF1BQ0VAM2 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RASGEF1BQ0VAM2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RASGEF1BQ0VAM2 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RASGEF1BQ0VAM2 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
RASGEF1BQ0VAM2 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.31■□□□□ 0.52
RASGEF1BQ0VAM2 TSPY6P-201ENST00000448518 926 ntBASIC18.31■□□□□ 0.52
RASGEF1BQ0VAM2 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.31■□□□□ 0.52
RASGEF1BQ0VAM2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.31■□□□□ 0.52
RASGEF1BQ0VAM2 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.31■□□□□ 0.52
RASGEF1BQ0VAM2 AC104771.1-201ENST00000603335 964 ntBASIC18.31■□□□□ 0.52
RASGEF1BQ0VAM2 AC100791.3-201ENST00000617619 330 ntBASIC18.31■□□□□ 0.52
RASGEF1BQ0VAM2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RASGEF1BQ0VAM2 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RASGEF1BQ0VAM2 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.31■□□□□ 0.52
RASGEF1BQ0VAM2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RASGEF1BQ0VAM2 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RASGEF1BQ0VAM2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.3■□□□□ 0.52
RASGEF1BQ0VAM2 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RASGEF1BQ0VAM2 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RASGEF1BQ0VAM2 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RASGEF1BQ0VAM2 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RASGEF1BQ0VAM2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RASGEF1BQ0VAM2 AC092667.1-201ENST00000434301 2586 ntBASIC18.3■□□□□ 0.52
RASGEF1BQ0VAM2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.3■□□□□ 0.52
RASGEF1BQ0VAM2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RASGEF1BQ0VAM2 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RASGEF1BQ0VAM2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RASGEF1BQ0VAM2 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.3■□□□□ 0.52
RASGEF1BQ0VAM2 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RASGEF1BQ0VAM2 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RASGEF1BQ0VAM2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.3■□□□□ 0.52
RASGEF1BQ0VAM2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RASGEF1BQ0VAM2 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RASGEF1BQ0VAM2 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.3■□□□□ 0.52
RASGEF1BQ0VAM2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RASGEF1BQ0VAM2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RASGEF1BQ0VAM2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.3■□□□□ 0.52
RASGEF1BQ0VAM2 AC073314.1-201ENST00000568729 2216 ntBASIC18.3■□□□□ 0.52
RASGEF1BQ0VAM2 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RASGEF1BQ0VAM2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RASGEF1BQ0VAM2 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.3■□□□□ 0.52
RASGEF1BQ0VAM2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
RASGEF1BQ0VAM2 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.3■□□□□ 0.52
RASGEF1BQ0VAM2 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RASGEF1BQ0VAM2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RASGEF1BQ0VAM2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RASGEF1BQ0VAM2 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RASGEF1BQ0VAM2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
RASGEF1BQ0VAM2 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
RASGEF1BQ0VAM2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RASGEF1BQ0VAM2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
RASGEF1BQ0VAM2 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
RASGEF1BQ0VAM2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RASGEF1BQ0VAM2 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RASGEF1BQ0VAM2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms