Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN18P56856 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN18P56856 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN18P56856 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN18P56856 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN18P56856 AL390719.1-204ENST00000412397 1219 ntBASIC18.1■□□□□ 0.49
CLDN18P56856 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.1■□□□□ 0.49
CLDN18P56856 AC023632.3-201ENST00000521633 145 ntBASIC18.1■□□□□ 0.49
CLDN18P56856 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.1■□□□□ 0.49
CLDN18P56856 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.1■□□□□ 0.49
CLDN18P56856 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CLDN18P56856 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN18P56856 AC006557.6-201ENST00000623071 864 ntBASIC18.1■□□□□ 0.49
CLDN18P56856 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN18P56856 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
CLDN18P56856 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN18P56856 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN18P56856 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN18P56856 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN18P56856 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.09■□□□□ 0.49
CLDN18P56856 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.09■□□□□ 0.49
CLDN18P56856 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CLDN18P56856 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN18P56856 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CLDN18P56856 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
CLDN18P56856 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CLDN18P56856 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.09■□□□□ 0.49
CLDN18P56856 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN18P56856 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN18P56856 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN18P56856 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN18P56856 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CLDN18P56856 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN18P56856 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.09■□□□□ 0.49
CLDN18P56856 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.09■□□□□ 0.49
CLDN18P56856 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.09■□□□□ 0.49
CLDN18P56856 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN18P56856 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN18P56856 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN18P56856 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
CLDN18P56856 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLDN18P56856 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.08■□□□□ 0.49
CLDN18P56856 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.08■□□□□ 0.49
CLDN18P56856 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLDN18P56856 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN18P56856 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.08■□□□□ 0.48
CLDN18P56856 POM121L13P-201ENST00000422362 380 ntBASIC18.08■□□□□ 0.48
CLDN18P56856 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.08■□□□□ 0.48
CLDN18P56856 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.08■□□□□ 0.48
CLDN18P56856 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.08■□□□□ 0.48
CLDN18P56856 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
CLDN18P56856 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN18P56856 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN18P56856 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN18P56856 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN18P56856 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.08■□□□□ 0.48
CLDN18P56856 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN18P56856 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.08■□□□□ 0.48
CLDN18P56856 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CLDN18P56856 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN18P56856 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN18P56856 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN18P56856 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.07■□□□□ 0.48
CLDN18P56856 AL137060.1-201ENST00000618151 2648 ntBASIC18.07■□□□□ 0.48
CLDN18P56856 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CLDN18P56856 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN18P56856 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN18P56856 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN18P56856 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.07■□□□□ 0.48
CLDN18P56856 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN18P56856 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CLDN18P56856 KRT17P3-201ENST00000420566 1262 ntBASIC18.07■□□□□ 0.48
CLDN18P56856 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.07■□□□□ 0.48
CLDN18P56856 AC098590.1-201ENST00000468126 897 ntBASIC18.07■□□□□ 0.48
CLDN18P56856 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.07■□□□□ 0.48
CLDN18P56856 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.07■□□□□ 0.48
CLDN18P56856 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.07■□□□□ 0.48
CLDN18P56856 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN18P56856 PTBP1P-201ENST00000554374 1601 ntBASIC18.07■□□□□ 0.48
CLDN18P56856 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN18P56856 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.07■□□□□ 0.48
CLDN18P56856 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.07■□□□□ 0.48
CLDN18P56856 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN18P56856 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.06■□□□□ 0.48
CLDN18P56856 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN18P56856 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN18P56856 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN18P56856 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.06■□□□□ 0.48
CLDN18P56856 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CLDN18P56856 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.06■□□□□ 0.48
CLDN18P56856 AC233263.1-201ENST00000578059 224 ntBASIC18.06■□□□□ 0.48
CLDN18P56856 AC069544.1-201ENST00000609399 999 ntBASIC18.06■□□□□ 0.48
CLDN18P56856 AC120498.8-201ENST00000614275 531 ntBASIC18.06■□□□□ 0.48
CLDN18P56856 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CLDN18P56856 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN18P56856 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.06■□□□□ 0.48
CLDN18P56856 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN18P56856 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN18P56856 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN18P56856 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms