Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN12P56749 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN12P56749 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN12P56749 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
CLDN12P56749 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CLDN12P56749 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CLDN12P56749 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN12P56749 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN12P56749 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN12P56749 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN12P56749 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN12P56749 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.54■□□□□ 0.4
CLDN12P56749 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDN12P56749 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
CLDN12P56749 AL136162.1-201ENST00000607711 1078 ntBASIC17.54■□□□□ 0.4
CLDN12P56749 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN12P56749 RARRES2P11-201ENST00000635158 484 ntBASIC17.54■□□□□ 0.4
CLDN12P56749 MIR2861-201ENST00000636310 90 ntBASIC17.54■□□□□ 0.4
CLDN12P56749 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN12P56749 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN12P56749 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDN12P56749 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
CLDN12P56749 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CLDN12P56749 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
CLDN12P56749 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN12P56749 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CLDN12P56749 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.54■□□□□ 0.4
CLDN12P56749 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN12P56749 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.53■□□□□ 0.4
CLDN12P56749 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN12P56749 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.53■□□□□ 0.4
CLDN12P56749 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN12P56749 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN12P56749 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.53■□□□□ 0.4
CLDN12P56749 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN12P56749 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN12P56749 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN12P56749 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN12P56749 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.53■□□□□ 0.4
CLDN12P56749 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.53■□□□□ 0.4
CLDN12P56749 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN12P56749 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CLDN12P56749 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.53■□□□□ 0.4
CLDN12P56749 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN12P56749 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.53■□□□□ 0.4
CLDN12P56749 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CLDN12P56749 AC099791.1-201ENST00000416440 715 ntBASIC17.53■□□□□ 0.4
CLDN12P56749 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.53■□□□□ 0.4
CLDN12P56749 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CLDN12P56749 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN12P56749 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.53■□□□□ 0.4
CLDN12P56749 AL691432.2-201ENST00000607222 2038 ntBASIC17.53■□□□□ 0.4
CLDN12P56749 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN12P56749 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN12P56749 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN12P56749 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.52■□□□□ 0.4
CLDN12P56749 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.52■□□□□ 0.4
CLDN12P56749 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN12P56749 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN12P56749 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN12P56749 TNXA-203ENST00000507684 2038 ntBASIC17.52■□□□□ 0.4
CLDN12P56749 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN12P56749 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.52■□□□□ 0.4
CLDN12P56749 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.52■□□□□ 0.4
CLDN12P56749 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.52■□□□□ 0.4
CLDN12P56749 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.52■□□□□ 0.4
CLDN12P56749 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CLDN12P56749 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLDN12P56749 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CLDN12P56749 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLDN12P56749 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLDN12P56749 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CLDN12P56749 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.52■□□□□ 0.39
CLDN12P56749 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLDN12P56749 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.51■□□□□ 0.39
CLDN12P56749 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.51■□□□□ 0.39
CLDN12P56749 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CLDN12P56749 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN12P56749 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.51■□□□□ 0.39
CLDN12P56749 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN12P56749 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN12P56749 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN12P56749 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN12P56749 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CLDN12P56749 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.51■□□□□ 0.39
CLDN12P56749 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.51■□□□□ 0.39
CLDN12P56749 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.51■□□□□ 0.39
CLDN12P56749 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.51■□□□□ 0.39
CLDN12P56749 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN12P56749 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN12P56749 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CLDN12P56749 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CLDN12P56749 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN12P56749 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN12P56749 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN12P56749 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN12P56749 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN12P56749 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN12P56749 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.5■□□□□ 0.39
CLDN12P56749 AC005332.7-201ENST00000614046 2005 ntBASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms