Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
AP1S2P56377 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
AP1S2P56377 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.69■□□□□ 0.74
AP1S2P56377 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
AP1S2P56377 DPP3P2-201ENST00000416030 1696 ntBASIC19.69■□□□□ 0.74
AP1S2P56377 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.69■□□□□ 0.74
AP1S2P56377 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP1S2P56377 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
AP1S2P56377 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP1S2P56377 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP1S2P56377 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.69■□□□□ 0.74
AP1S2P56377 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
AP1S2P56377 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP1S2P56377 AL589743.5-201ENST00000616611 1050 ntBASIC19.69■□□□□ 0.74
AP1S2P56377 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
AP1S2P56377 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
AP1S2P56377 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
AP1S2P56377 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
AP1S2P56377 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
AP1S2P56377 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.69■□□□□ 0.74
AP1S2P56377 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.69■□□□□ 0.74
AP1S2P56377 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
AP1S2P56377 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
AP1S2P56377 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP1S2P56377 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP1S2P56377 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP1S2P56377 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
AP1S2P56377 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
AP1S2P56377 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP1S2P56377 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP1S2P56377 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP1S2P56377 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP1S2P56377 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP1S2P56377 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
AP1S2P56377 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
AP1S2P56377 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.68■□□□□ 0.74
AP1S2P56377 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
AP1S2P56377 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
AP1S2P56377 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
AP1S2P56377 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.68■□□□□ 0.74
AP1S2P56377 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP1S2P56377 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.68■□□□□ 0.74
AP1S2P56377 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP1S2P56377 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP1S2P56377 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
AP1S2P56377 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP1S2P56377 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
AP1S2P56377 AC073130.3-201ENST00000624389 2278 ntBASIC19.68■□□□□ 0.74
AP1S2P56377 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
AP1S2P56377 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP1S2P56377 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.68■□□□□ 0.74
AP1S2P56377 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.68■□□□□ 0.74
AP1S2P56377 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.67■□□□□ 0.74
AP1S2P56377 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP1S2P56377 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
AP1S2P56377 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.67■□□□□ 0.74
AP1S2P56377 SMG8-203ENST00000578922 2178 ntBASIC19.67■□□□□ 0.74
AP1S2P56377 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
AP1S2P56377 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP1S2P56377 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
AP1S2P56377 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP1S2P56377 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP1S2P56377 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP1S2P56377 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP1S2P56377 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP1S2P56377 MIR663A-201ENST00000385250 93 ntBASIC19.67■□□□□ 0.74
AP1S2P56377 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.67■□□□□ 0.74
AP1S2P56377 AC093787.1-201ENST00000450396 207 ntBASIC19.67■□□□□ 0.74
AP1S2P56377 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.67■□□□□ 0.74
AP1S2P56377 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP1S2P56377 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.67■□□□□ 0.74
AP1S2P56377 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP1S2P56377 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.67■□□□□ 0.74
AP1S2P56377 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.67■□□□□ 0.74
AP1S2P56377 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
AP1S2P56377 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP1S2P56377 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.67■□□□□ 0.74
AP1S2P56377 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.67■□□□□ 0.74
AP1S2P56377 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
AP1S2P56377 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP1S2P56377 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP1S2P56377 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.66■□□□□ 0.74
AP1S2P56377 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.66■□□□□ 0.74
AP1S2P56377 AF201337.1-201ENST00000520239 748 ntBASIC19.66■□□□□ 0.74
AP1S2P56377 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.66■□□□□ 0.74
AP1S2P56377 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.66■□□□□ 0.74
AP1S2P56377 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.66■□□□□ 0.74
AP1S2P56377 AL050303.2-201ENST00000619798 666 ntBASIC19.66■□□□□ 0.74
AP1S2P56377 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
AP1S2P56377 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP1S2P56377 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP1S2P56377 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
AP1S2P56377 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.66■□□□□ 0.74
AP1S2P56377 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP1S2P56377 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.65■□□□□ 0.74
AP1S2P56377 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.65■□□□□ 0.74
AP1S2P56377 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP1S2P56377 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
AP1S2P56377 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
AP1S2P56377 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms