Protein–RNA interactions for Protein: P56181

NDUFV3, NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFV3P56181 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NDUFV3P56181 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NDUFV3P56181 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFV3P56181 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFV3P56181 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFV3P56181 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC13.1□□□□□ -0.31
NDUFV3P56181 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFV3P56181 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFV3P56181 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFV3P56181 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFV3P56181 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
NDUFV3P56181 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFV3P56181 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFV3P56181 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC13.1□□□□□ -0.31
NDUFV3P56181 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
NDUFV3P56181 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC13.1□□□□□ -0.31
NDUFV3P56181 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC13.1□□□□□ -0.31
NDUFV3P56181 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC13.1□□□□□ -0.31
NDUFV3P56181 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFV3P56181 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC13.1□□□□□ -0.31
NDUFV3P56181 AC073314.1-201ENST00000568729 2216 ntBASIC13.1□□□□□ -0.31
NDUFV3P56181 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFV3P56181 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
NDUFV3P56181 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
NDUFV3P56181 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC13.1□□□□□ -0.31
NDUFV3P56181 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC13.1□□□□□ -0.31
NDUFV3P56181 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFV3P56181 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFV3P56181 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFV3P56181 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFV3P56181 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFV3P56181 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFV3P56181 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFV3P56181 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
NDUFV3P56181 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC13.09□□□□□ -0.31
NDUFV3P56181 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC13.09□□□□□ -0.31
NDUFV3P56181 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
NDUFV3P56181 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
NDUFV3P56181 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NDUFV3P56181 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NDUFV3P56181 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
NDUFV3P56181 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NDUFV3P56181 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NDUFV3P56181 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NDUFV3P56181 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NDUFV3P56181 MIR639-201ENST00000384974 98 ntBASIC13.09□□□□□ -0.31
NDUFV3P56181 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC13.09□□□□□ -0.31
NDUFV3P56181 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
NDUFV3P56181 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
NDUFV3P56181 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
NDUFV3P56181 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
NDUFV3P56181 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NDUFV3P56181 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
NDUFV3P56181 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NDUFV3P56181 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NDUFV3P56181 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NDUFV3P56181 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NDUFV3P56181 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
NDUFV3P56181 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NDUFV3P56181 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NDUFV3P56181 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC13.09□□□□□ -0.31
NDUFV3P56181 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
NDUFV3P56181 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NDUFV3P56181 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
NDUFV3P56181 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC13.08□□□□□ -0.31
NDUFV3P56181 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
NDUFV3P56181 ME2-216ENST00000639850 2331 ntTSL 5 BASIC13.08□□□□□ -0.31
NDUFV3P56181 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.08□□□□□ -0.31
NDUFV3P56181 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.31
NDUFV3P56181 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC13.08□□□□□ -0.31
NDUFV3P56181 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFV3P56181 AC009053.2-201ENST00000563701 2365 ntBASIC13.08□□□□□ -0.32
NDUFV3P56181 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFV3P56181 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFV3P56181 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFV3P56181 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFV3P56181 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
NDUFV3P56181 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFV3P56181 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFV3P56181 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFV3P56181 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFV3P56181 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC13.08□□□□□ -0.32
NDUFV3P56181 ASB1-202ENST00000409297 878 ntTSL 5 BASIC13.08□□□□□ -0.32
NDUFV3P56181 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFV3P56181 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFV3P56181 AC019171.1-201ENST00000601251 1056 ntBASIC13.08□□□□□ -0.32
NDUFV3P56181 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
NDUFV3P56181 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC13.08□□□□□ -0.32
NDUFV3P56181 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFV3P56181 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC13.08□□□□□ -0.32
NDUFV3P56181 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.08□□□□□ -0.32
NDUFV3P56181 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFV3P56181 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFV3P56181 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
NDUFV3P56181 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFV3P56181 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFV3P56181 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
NDUFV3P56181 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
NDUFV3P56181 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFV3P56181 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms