Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.89■□□□□ 0.61
SMSP52788 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMSP52788 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMSP52788 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SMSP52788 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SMSP52788 AC027702.1-201ENST00000563810 1770 ntBASIC18.88■□□□□ 0.61
SMSP52788 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMSP52788 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMSP52788 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMSP52788 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMSP52788 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SMSP52788 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMSP52788 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SMSP52788 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.88■□□□□ 0.61
SMSP52788 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SMSP52788 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.88■□□□□ 0.61
SMSP52788 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SMSP52788 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.88■□□□□ 0.61
SMSP52788 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.88■□□□□ 0.61
SMSP52788 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SMSP52788 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMSP52788 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMSP52788 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SMSP52788 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMSP52788 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMSP52788 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
SMSP52788 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SMSP52788 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMSP52788 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMSP52788 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMSP52788 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SMSP52788 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMSP52788 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.87■□□□□ 0.61
SMSP52788 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMSP52788 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMSP52788 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SMSP52788 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
SMSP52788 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.87■□□□□ 0.61
SMSP52788 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
SMSP52788 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SMSP52788 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.87■□□□□ 0.61
SMSP52788 AC053503.5-201ENST00000601508 636 ntBASIC18.87■□□□□ 0.61
SMSP52788 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.87■□□□□ 0.61
SMSP52788 AC020907.5-201ENST00000624372 1936 ntBASIC18.87■□□□□ 0.61
SMSP52788 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMSP52788 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SMSP52788 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SMSP52788 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMSP52788 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMSP52788 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMSP52788 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SMSP52788 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMSP52788 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.86■□□□□ 0.61
SMSP52788 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMSP52788 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SMSP52788 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMSP52788 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SMSP52788 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMSP52788 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMSP52788 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SMSP52788 AL512625.2-201ENST00000417533 625 ntBASIC18.86■□□□□ 0.61
SMSP52788 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.86■□□□□ 0.61
SMSP52788 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.86■□□□□ 0.61
SMSP52788 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.86■□□□□ 0.61
SMSP52788 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.86■□□□□ 0.61
SMSP52788 AC092118.2-201ENST00000613495 667 ntBASIC18.86■□□□□ 0.61
SMSP52788 AP006294.2-201ENST00000641667 209 ntBASIC18.86■□□□□ 0.61
SMSP52788 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMSP52788 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SMSP52788 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMSP52788 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.86■□□□□ 0.61
SMSP52788 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SMSP52788 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SMSP52788 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SMSP52788 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMSP52788 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SMSP52788 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMSP52788 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SMSP52788 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMSP52788 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMSP52788 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMSP52788 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMSP52788 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMSP52788 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.85■□□□□ 0.61
SMSP52788 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.85■□□□□ 0.61
SMSP52788 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.85■□□□□ 0.61
SMSP52788 EEF1DP3-203ENST00000566025 782 ntBASIC18.85■□□□□ 0.61
SMSP52788 AC008175.2-201ENST00000612840 297 ntBASIC18.85■□□□□ 0.61
SMSP52788 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.85■□□□□ 0.61
SMSP52788 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.85■□□□□ 0.61
SMSP52788 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMSP52788 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.85■□□□□ 0.61
SMSP52788 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMSP52788 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMSP52788 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMSP52788 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMSP52788 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.84■□□□□ 0.61
SMSP52788 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMSP52788 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMSP52788 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms