Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.11■□□□□ 0.49
LHX2P50458 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LHX2P50458 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LHX2P50458 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LHX2P50458 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.11■□□□□ 0.49
LHX2P50458 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
LHX2P50458 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.11■□□□□ 0.49
LHX2P50458 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
LHX2P50458 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
LHX2P50458 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LHX2P50458 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.1■□□□□ 0.49
LHX2P50458 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LHX2P50458 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.1■□□□□ 0.49
LHX2P50458 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.1■□□□□ 0.49
LHX2P50458 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LHX2P50458 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LHX2P50458 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.1■□□□□ 0.49
LHX2P50458 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
LHX2P50458 KRT17P3-201ENST00000420566 1262 ntBASIC18.1■□□□□ 0.49
LHX2P50458 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.1■□□□□ 0.49
LHX2P50458 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.1■□□□□ 0.49
LHX2P50458 AC098590.1-201ENST00000468126 897 ntBASIC18.1■□□□□ 0.49
LHX2P50458 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.1■□□□□ 0.49
LHX2P50458 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LHX2P50458 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.1■□□□□ 0.49
LHX2P50458 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LHX2P50458 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LHX2P50458 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LHX2P50458 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LHX2P50458 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LHX2P50458 AL137060.1-201ENST00000618151 2648 ntBASIC18.09■□□□□ 0.49
LHX2P50458 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LHX2P50458 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LHX2P50458 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.09■□□□□ 0.49
LHX2P50458 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LHX2P50458 POM121L13P-201ENST00000422362 380 ntBASIC18.09■□□□□ 0.49
LHX2P50458 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
LHX2P50458 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.09■□□□□ 0.49
LHX2P50458 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.09■□□□□ 0.49
LHX2P50458 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.09■□□□□ 0.49
LHX2P50458 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LHX2P50458 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.09■□□□□ 0.49
LHX2P50458 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LHX2P50458 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.09■□□□□ 0.49
LHX2P50458 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
LHX2P50458 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LHX2P50458 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LHX2P50458 PTBP1P-201ENST00000554374 1601 ntBASIC18.09■□□□□ 0.49
LHX2P50458 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.09■□□□□ 0.49
LHX2P50458 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.08■□□□□ 0.49
LHX2P50458 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LHX2P50458 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
LHX2P50458 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.08■□□□□ 0.48
LHX2P50458 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
LHX2P50458 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.08■□□□□ 0.48
LHX2P50458 AC120498.8-201ENST00000614275 531 ntBASIC18.08■□□□□ 0.48
LHX2P50458 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LHX2P50458 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LHX2P50458 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LHX2P50458 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LHX2P50458 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
LHX2P50458 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LHX2P50458 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LHX2P50458 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
LHX2P50458 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LHX2P50458 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.07■□□□□ 0.48
LHX2P50458 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.07■□□□□ 0.48
LHX2P50458 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LHX2P50458 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LHX2P50458 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
LHX2P50458 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.07■□□□□ 0.48
LHX2P50458 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LHX2P50458 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.07■□□□□ 0.48
LHX2P50458 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LHX2P50458 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
LHX2P50458 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.07■□□□□ 0.48
LHX2P50458 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LHX2P50458 AC233263.1-201ENST00000578059 224 ntBASIC18.07■□□□□ 0.48
LHX2P50458 AC069544.1-201ENST00000609399 999 ntBASIC18.07■□□□□ 0.48
LHX2P50458 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LHX2P50458 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.07■□□□□ 0.48
LHX2P50458 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LHX2P50458 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.07■□□□□ 0.48
LHX2P50458 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LHX2P50458 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.07■□□□□ 0.48
LHX2P50458 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LHX2P50458 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.06■□□□□ 0.48
LHX2P50458 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.06■□□□□ 0.48
LHX2P50458 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LHX2P50458 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.06■□□□□ 0.48
LHX2P50458 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LHX2P50458 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LHX2P50458 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LHX2P50458 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
LHX2P50458 GCSHP5-201ENST00000443090 522 ntBASIC18.06■□□□□ 0.48
LHX2P50458 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.06■□□□□ 0.48
LHX2P50458 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.06■□□□□ 0.48
LHX2P50458 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LHX2P50458 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LHX2P50458 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms