Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLC6A12P48065 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.57■□□□□ 0.72
SLC6A12P48065 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC6A12P48065 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC6A12P48065 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC6A12P48065 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC6A12P48065 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC6A12P48065 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC6A12P48065 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC6A12P48065 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC6A12P48065 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC6A12P48065 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC6A12P48065 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC6A12P48065 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC6A12P48065 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC6A12P48065 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.56■□□□□ 0.72
SLC6A12P48065 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC6A12P48065 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC6A12P48065 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.56■□□□□ 0.72
SLC6A12P48065 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.56■□□□□ 0.72
SLC6A12P48065 TCF3P1-201ENST00000423021 1937 ntBASIC19.56■□□□□ 0.72
SLC6A12P48065 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC6A12P48065 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SLC6A12P48065 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC6A12P48065 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC6A12P48065 PTBP1P-201ENST00000554374 1601 ntBASIC19.55■□□□□ 0.72
SLC6A12P48065 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.55■□□□□ 0.72
SLC6A12P48065 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC6A12P48065 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC6A12P48065 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC6A12P48065 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC6A12P48065 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SLC6A12P48065 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
SLC6A12P48065 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.55■□□□□ 0.72
SLC6A12P48065 CROCCP5-201ENST00000436658 830 ntBASIC19.55■□□□□ 0.72
SLC6A12P48065 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC6A12P48065 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SLC6A12P48065 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
SLC6A12P48065 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.55■□□□□ 0.72
SLC6A12P48065 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC6A12P48065 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.55■□□□□ 0.72
SLC6A12P48065 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.55■□□□□ 0.72
SLC6A12P48065 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.55■□□□□ 0.72
SLC6A12P48065 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC6A12P48065 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC6A12P48065 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC6A12P48065 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC6A12P48065 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC6A12P48065 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SLC6A12P48065 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC6A12P48065 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC6A12P48065 MIR663A-201ENST00000385250 93 ntBASIC19.54■□□□□ 0.72
SLC6A12P48065 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC6A12P48065 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC6A12P48065 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SLC6A12P48065 KRT17P1-201ENST00000399211 1546 ntBASIC19.54■□□□□ 0.72
SLC6A12P48065 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC6A12P48065 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC6A12P48065 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
SLC6A12P48065 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC6A12P48065 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC6A12P48065 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.53■□□□□ 0.72
SLC6A12P48065 BX119927.1-201ENST00000636596 1552 ntBASIC19.53■□□□□ 0.72
SLC6A12P48065 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC6A12P48065 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC6A12P48065 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
SLC6A12P48065 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.53■□□□□ 0.72
SLC6A12P48065 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC6A12P48065 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC6A12P48065 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
SLC6A12P48065 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.53■□□□□ 0.72
SLC6A12P48065 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC6A12P48065 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.53■□□□□ 0.72
SLC6A12P48065 AL589743.5-201ENST00000616611 1050 ntBASIC19.53■□□□□ 0.72
SLC6A12P48065 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC6A12P48065 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC6A12P48065 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC6A12P48065 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SLC6A12P48065 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.52■□□□□ 0.72
SLC6A12P48065 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.52■□□□□ 0.72
SLC6A12P48065 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SLC6A12P48065 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC6A12P48065 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC6A12P48065 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SLC6A12P48065 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC6A12P48065 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.52■□□□□ 0.72
SLC6A12P48065 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.52■□□□□ 0.72
SLC6A12P48065 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC6A12P48065 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC6A12P48065 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SLC6A12P48065 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SLC6A12P48065 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
SLC6A12P48065 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC6A12P48065 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.51■□□□□ 0.71
SLC6A12P48065 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC6A12P48065 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SLC6A12P48065 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SLC6A12P48065 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
SLC6A12P48065 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC6A12P48065 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms