Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 NACA-204ENST00000546392 802 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.84e-7■■■■□ 22
MATR3P43243 NACA-220ENST00000552055 521 ntTSL 59.33□□□□□ -0.924e-7■■■■□ 22
MATR3P43243 NACA-216ENST00000550952 2922 ntTSL 2 BASIC8.74□□□□□ -1.014e-7■■■■□ 22
MATR3P43243 NACA-203ENST00000454682 6629 ntTSL 5 BASIC8.69□□□□□ -1.024e-7■■■■□ 22
MATR3P43243 NACA-218ENST00000551775 449 ntTSL 58.61□□□□□ -1.034e-7■■■■□ 22
MATR3P43243 NACA-208ENST00000547914 543 ntTSL 58.56□□□□□ -1.044e-7■■■■□ 22
MATR3P43243 NACA-219ENST00000551793 768 ntTSL 27.12□□□□□ -1.274e-7■■■■□ 22
MATR3P43243 NACA-217ENST00000551520 544 ntTSL 26.97□□□□□ -1.294e-7■■■■□ 22
MATR3P43243 NACA-206ENST00000546862 492 ntTSL 35.01□□□□□ -1.614e-7■■■■□ 22
MATR3P43243 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.87□□□□□ -1.794e-7■■■■□ 22
MATR3P43243 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -01e-6■■■■□ 22
MATR3P43243 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.041e-6■■■■□ 22
MATR3P43243 DOCK1-206ENST00000623213 5761 ntTSL 1 (best) BASIC10.7□□□□□ -0.75e-7■■■■□ 22
MATR3P43243 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.715e-7■■■■□ 22
MATR3P43243 USP40-203ENST00000427112 3744 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.831e-6■■■■□ 22
MATR3P43243 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC26.45■■□□□ 1.821e-6■■■■□ 22
MATR3P43243 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC23.17■■□□□ 1.31e-6■■■■□ 22
MATR3P43243 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC17.39■□□□□ 0.371e-6■■■■□ 22
MATR3P43243 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC16.73■□□□□ 0.271e-6■■■■□ 22
MATR3P43243 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.181e-6■■■■□ 22
MATR3P43243 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC15.38■□□□□ 0.051e-6■■■■□ 22
MATR3P43243 AFDN-207ENST00000400822 7593 ntTSL 5 BASIC13.16□□□□□ -0.31e-6■■■■□ 22
MATR3P43243 AFDN-204ENST00000366809 4839 ntTSL 1 (best)11.07□□□□□ -0.641e-6■■■■□ 22
MATR3P43243 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.09□□□□□ -1.432e-6■■■■□ 22
MATR3P43243 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.85□□□□□ -1.472e-6■■■■□ 22
MATR3P43243 RNF217-208ENST00000519799 450 ntTSL 42.5□□□□□ -2.012e-6■■■■□ 22
MATR3P43243 ALG13-227ENST00000622997 594 ntTSL 516.89■□□□□ 0.296e-7■■■■□ 22
MATR3P43243 ALG13-210ENST00000471924 711 ntTSL 315.03■□□□□ -06e-7■■■■□ 22
MATR3P43243 ALG13-223ENST00000495283 3236 ntTSL 211.91□□□□□ -0.56e-7■■■■□ 22
MATR3P43243 ALG13-225ENST00000621367 3893 ntTSL 2 BASIC11.27□□□□□ -0.616e-7■■■■□ 22
MATR3P43243 ALG13-229ENST00000623148 3689 ntTSL 210.51□□□□□ -0.736e-7■■■■□ 22
MATR3P43243 ALG13-228ENST00000623144 3693 ntTSL 210.37□□□□□ -0.756e-7■■■■□ 22
MATR3P43243 ALG13-204ENST00000436609 3812 ntTSL 5 BASIC10.33□□□□□ -0.766e-7■■■■□ 22
MATR3P43243 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC9.13□□□□□ -0.956e-7■■■■□ 22
MATR3P43243 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC8.78□□□□□ -16e-7■■■■□ 22
MATR3P43243 ALG13-216ENST00000486353 916 ntTSL 58.1□□□□□ -1.116e-7■■■■□ 22
MATR3P43243 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.316e-7■■■■□ 22
MATR3P43243 ALG13-239ENST00000636363 3480 ntTSL 55.89□□□□□ -1.476e-7■■■■□ 22
MATR3P43243 ALG13-208ENST00000470704 536 ntTSL 25.71□□□□□ -1.56e-7■■■■□ 22
MATR3P43243 ALG13-235ENST00000624881 876 ntTSL 55.38□□□□□ -1.556e-7■■■■□ 22
MATR3P43243 ALG13-234ENST00000624161 3761 ntTSL 25.38□□□□□ -1.556e-7■■■■□ 22
MATR3P43243 ALG13-218ENST00000487141 745 ntTSL 55.27□□□□□ -1.576e-7■■■■□ 22
MATR3P43243 ALG13-209ENST00000470971 3200 ntTSL 53.61□□□□□ -1.836e-7■■■■□ 22
MATR3P43243 SEMA4B-206ENST00000558895 533 ntTSL 426.88■■□□□ 1.892e-6■■■■□ 22
MATR3P43243 PI4KA-215ENST00000485963 2301 ntTSL 226.03■■□□□ 1.768e-12■■■■□ 22
MATR3P43243 SEMA4B-218ENST00000561085 582 ntTSL 425.2■■□□□ 1.622e-6■■■■□ 22
MATR3P43243 SEMA4B-212ENST00000559792 585 ntTSL 423.49■■□□□ 1.352e-6■■■■□ 22
MATR3P43243 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.31■■□□□ 1.325e-7■■■■□ 22
MATR3P43243 CARD11-202ENST00000356408 584 ntTSL 323.07■■□□□ 1.282e-6■■■■□ 22
MATR3P43243 OPA1-207ENST00000392437 631 ntTSL 322.74■■□□□ 1.232e-6■■■■□ 22
MATR3P43243 RBPJ-216ENST00000509158 555 ntTSL 222.47■■□□□ 1.192e-6■■■■□ 22
MATR3P43243 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC22.46■■□□□ 1.195e-7■■■■□ 22
MATR3P43243 UBE2F-206ENST00000416292 552 ntTSL 222.42■■□□□ 1.182e-6■■■■□ 22
MATR3P43243 UBE2F-212ENST00000439338 873 ntTSL 522.42■■□□□ 1.182e-6■■■■□ 22
MATR3P43243 UBE2F-217ENST00000448502 561 ntTSL 422.1■■□□□ 1.132e-6■■■■□ 22
MATR3P43243 UBE2F-215ENST00000441728 1242 ntTSL 221.83■■□□□ 1.092e-6■■■■□ 22
MATR3P43243 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.092e-6■■■■□ 22
MATR3P43243 UBE2F-207ENST00000417231 984 ntTSL 521.69■■□□□ 1.062e-6■■■■□ 22
MATR3P43243 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.54■■□□□ 1.042e-6■■■■□ 22
MATR3P43243 UBE2F-209ENST00000433568 574 ntTSL 421.54■■□□□ 1.042e-6■■■■□ 22
MATR3P43243 OPA1-209ENST00000419435 780 ntTSL 321.25■□□□□ 0.992e-6■■■■□ 22
MATR3P43243 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.22■□□□□ 0.992e-6■■■■□ 22
MATR3P43243 SEMA4B-215ENST00000560089 2804 ntTSL 1 (best)21.21■□□□□ 0.992e-6■■■■□ 22
MATR3P43243 GLG1-213ENST00000567951 2918 ntTSL 1 (best)21.18■□□□□ 0.989e-7■■■■□ 22
MATR3P43243 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.942e-6■■■■□ 22
MATR3P43243 SEMA4B-211ENST00000559322 559 ntTSL 420.91■□□□□ 0.942e-6■■■■□ 22
MATR3P43243 IL4I1-208ENST00000601717 2261 ntTSL 1 (best)20.77■□□□□ 0.922e-6■■■■□ 22
MATR3P43243 SEMA4B-210ENST00000559300 541 ntTSL 419.8■□□□□ 0.762e-6■■■■□ 22
MATR3P43243 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.712e-6■■■■□ 22
MATR3P43243 PI4KA-203ENST00000449120 574 ntTSL 419.29■□□□□ 0.688e-12■■■■□ 22
MATR3P43243 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.632e-6■■■■□ 22
MATR3P43243 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.62e-6■■■■□ 22
MATR3P43243 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.592e-6■■■■□ 22
MATR3P43243 UBE2F-218ENST00000454786 1292 ntTSL 518.75■□□□□ 0.592e-6■■■■□ 22
MATR3P43243 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.592e-6■■■■□ 22
MATR3P43243 IL4I1-206ENST00000596022 747 ntTSL 218.68■□□□□ 0.582e-6■■■■□ 22
MATR3P43243 TRAPPC11-204ENST00000505676 2244 ntTSL 1 (best)18.58■□□□□ 0.562e-6■■■■□ 22
MATR3P43243 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.552e-6■■■■□ 22
MATR3P43243 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.539e-7■■■■□ 22
MATR3P43243 SEMA4B-203ENST00000558051 552 ntTSL 418.34■□□□□ 0.532e-6■■■■□ 22
MATR3P43243 TPT1-AS1-220ENST00000524062 2285 ntTSL 218.33■□□□□ 0.525e-7■■■■□ 22
MATR3P43243 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC18.15■□□□□ 0.52e-6■■■■□ 22
MATR3P43243 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.472e-6■■■■□ 22
MATR3P43243 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.479e-7■■■■□ 22
MATR3P43243 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.462e-6■■■■□ 22
MATR3P43243 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.88■□□□□ 0.452e-6■■■■□ 22
MATR3P43243 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.75■□□□□ 0.435e-7■■■■□ 22
MATR3P43243 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.68■□□□□ 0.422e-6■■■■□ 22
MATR3P43243 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.422e-6■■■■□ 22
MATR3P43243 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC17.6■□□□□ 0.412e-6■■■■□ 22
MATR3P43243 UBE2F-214ENST00000440223 830 ntTSL 317.45■□□□□ 0.382e-6■■■■□ 22
MATR3P43243 NUP62-204ENST00000594673 564 ntTSL 517.33■□□□□ 0.362e-6■■■■□ 22
MATR3P43243 NUP62-206ENST00000595463 563 ntTSL 417.22■□□□□ 0.352e-6■■■■□ 22
MATR3P43243 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.32e-6■■■■□ 22
MATR3P43243 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.292e-6■■■■□ 22
MATR3P43243 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.289e-7■■■■□ 22
MATR3P43243 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.78■□□□□ 0.282e-6■■■■□ 22
MATR3P43243 RAB3GAP2-201ENST00000237724 821 ntTSL 316.75■□□□□ 0.272e-6■■■■□ 22
MATR3P43243 RBPJ-223ENST00000512671 795 ntTSL 216.71■□□□□ 0.272e-6■■■■□ 22
MATR3P43243 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.69■□□□□ 0.262e-6■■■■□ 22
Retrieved 100 of 16,209 protein–RNA pairs in 116.8 ms